Analysis of interatomic Contacts of Structural Units in PDB entry:
4W4R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4W4R entry

There are 2 chains in PDB entry 4W4R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 281
B
 GLN 3ASP 290
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 4W4R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 16Right-handed alpha
Helix 2
AA2
A
22 52Right-handed alpha
Helix 3
AA3
A
57 81Right-handed alpha
Helix 4
AA4
A
84 98Right-handed alpha
Helix 5
AA5
A
106 120Right-handed alpha
Helix 6
AA6
A
123 148Right-handed alpha
Helix 7
AA7
A
154 166Right-handed alpha
Helix 8
AA8
A
167 180Right-handed alpha
Helix 9
AA9
A
182 187Right-handed alpha
Helix 10
AB1
A
189 210Right-handed alpha
Helix 11
AB2
A
223 230Right-handed alpha
Helix 12
AB3
A
236 259Right-handed alpha
Helix 13
AB4
A
264 275Right-handed alpha
Helix 14
AB5
A
276 281Right-handed alpha
Helix 15
AB6
B
4 16Right-handed alpha
Helix 16
AB7
B
22 52Right-handed alpha
Helix 17
AB8
B
57 81Right-handed alpha
Helix 18
AB9
B
84 98Right-handed alpha
Helix 19
AC1
B
106 120Right-handed alpha
Helix 20
AC2
B
122 147Right-handed alpha
Helix 21
AC3
B
154 166Right-handed alpha
Helix 22
AC4
B
167 180Right-handed alpha
Helix 23
AC5
B
182 187Right-handed alpha
Helix 24
AC6
B
189 209Right-handed alpha
Helix 25
AC7
B
224 232Right-handed alpha
Helix 26
AC8
B
236 259Right-handed alpha
Helix 27
AC9
B
264 275Right-handed alpha
Helix 28
AD1
B
276 280Right-handed 310
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There are no sheets in PDB entry 4W4R
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il