Analysis of interatomic Contacts of Structural Units in PDB entry:
4W4T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4W4T entry

There are 2 chains in PDB entry 4W4T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 1120GLU 1513
B
 ASP 1120GLU 1513
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 37 helices in PDB entry 4W4T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1120 1129Right-handed alpha
Helix 2
AA2
A
1158 1172Right-handed alpha
Helix 3
AA3
A
1184 1199Right-handed alpha
Helix 4
AA4
A
1203 1208Right-handed 310
Helix 5
AA5
A
1219 1224Right-handed 310
Helix 6
AA6
A
1225 1236Right-handed alpha
Helix 7
AA7
A
1251 1271Right-handed alpha
Helix 8
AA8
A
1283 1287Right-handed 310
Helix 9
AA9
A
1303 1307Right-handed 310
Helix 10
AB1
A
1309 1328Right-handed alpha
Helix 11
AB2
A
1353 1366Right-handed alpha
Helix 12
AB3
A
1380 1392Right-handed alpha
Helix 13
AB4
A
1393 1397Right-handed 310
Helix 14
AB5
A
1410 1422Right-handed alpha
Helix 15
AB6
A
1430 1442Right-handed alpha
Helix 16
AB7
A
1444 1456Right-handed alpha
Helix 17
AB8
A
1474 1482Right-handed alpha
Helix 18
AB9
A
1492 1506Right-handed alpha
Helix 19
AC1
B
1121 1129Right-handed alpha
Helix 20
AC2
B
1158 1172Right-handed alpha
Helix 21
AC3
B
1184 1198Right-handed alpha
Helix 22
AC4
B
1203 1208Right-handed 310
Helix 23
AC5
B
1219 1224Right-handed 310
Helix 24
AC6
B
1225 1236Right-handed alpha
Helix 25
AC7
B
1251 1260Right-handed alpha
Helix 26
AC8
B
1260 1271Right-handed alpha
Helix 27
AC9
B
1283 1287Right-handed 310
Helix 28
AD1
B
1303 1307Right-handed 310
Helix 29
AD2
B
1309 1328Right-handed alpha
Helix 30
AD3
B
1353 1366Right-handed alpha
Helix 31
AD4
B
1380 1392Right-handed alpha
Helix 32
AD5
B
1393 1397Right-handed 310
Helix 33
AD6
B
1410 1422Right-handed alpha
Helix 34
AD7
B
1430 1441Right-handed alpha
Helix 35
AD8
B
1444 1455Right-handed alpha
Helix 36
AD9
B
1474 1481Right-handed alpha
Helix 37
AE1
B
1492 1506Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 4W4T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1210 1214first strand
Strand 2
A
1175 1180parallel
Strand 3
A
1150 1154parallel
Strand 4
A
1238 1241parallel
Strand 5
A
1278 1281parallel
Strand 6
A
1332 1337parallel
Strand 7
A
1400 1403parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1340 1341first strand
Strand 2
A
1378 1379parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1367 1370first strand
Strand 2
A
1426 1429parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1210 1214first strand
Strand 2
B
1175 1180parallel
Strand 3
B
1150 1154parallel
Strand 4
B
1238 1241parallel
Strand 5
B
1278 1281parallel
Strand 6
B
1332 1337parallel
Strand 7
B
1400 1403parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1340 1341first strand
Strand 2
B
1378 1379parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1367 1370first strand
Strand 2
B
1426 1429parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il