Analysis of interatomic Contacts of Structural Units in PDB entry:
4WA0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WA0 entry

There is 1 chain in PDB entry 4WA0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 235GLN 592
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 4WA0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
240 242Right-handed 310
Helix 2
AA2
A
424 430Right-handed alpha
Helix 3
AA3
A
450 459Right-handed alpha
Helix 4
AA4
A
503 515Right-handed alpha
Helix 5
AA5
A
575 587Right-handed alpha
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There are 4 sheets in PDB entry 4WA0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
500 502first strand
Strand 2
A
533 536parallel
Strand 3
A
554 559parallel
Strand 4
A
251 253parallel
Strand 5
A
271 273parallel
Strand 6
A
290 292parallel
Strand 7
A
317 319parallel
Strand 8
A
340 342parallel
Strand 9
A
359 362parallel
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There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
481 485first strand
Strand 2
A
492 497anti-parallel
Strand 3
A
525 530parallel
Strand 4
A
542 550parallel
Strand 5
A
244 248parallel
Strand 6
A
264 267parallel
Strand 7
A
284 286parallel
Strand 8
A
303 313parallel
Strand 9
A
278 281parallel
Strand 10
A
258 261parallel
Strand 11
A
567 571parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
327 336first strand
Strand 2
A
346 355parallel
Strand 3
A
366 383parallel
Strand 4
A
395 404parallel
Strand 5
A
416 419parallel
Strand 6
A
437 439parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
366 383first strand
Strand 2
A
387 390parallel
Strand 3
A
408 411parallel
Strand 4
A
431 433parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il