Analysis of interatomic Contacts of Structural Units in PDB entry:
4WAN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WAN entry

There are 8 chains in PDB entry 4WAN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 145GLU 268
B
 A 2 A 10
C
 PRO 145ASP 269
D
 U 1 A 10
E
 THR 146ARG 267
F
 U 1 A 10
G
 LYS 147GLU 268
H
 A 2 A 10
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 18 helices in PDB entry 4WAN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
163 170Right-handed alpha
Helix 2
AA2
A
173 184Right-handed alpha
Helix 3
AA3
A
200 204Right-handed 310
Helix 4
AA4
A
223 243Right-handed alpha
Helix 5
AA5
A
249 263Right-handed alpha
Helix 6
AA6
C
163 170Right-handed alpha
Helix 7
AA7
C
173 184Right-handed alpha
Helix 8
AA8
C
200 204Right-handed 310
Helix 9
AA9
C
223 243Right-handed alpha
Helix 10
AB1
C
249 263Right-handed alpha
Helix 11
AB2
E
163 170Right-handed alpha
Helix 12
AB3
E
173 184Right-handed alpha
Helix 13
AB4
E
223 244Right-handed alpha
Helix 14
AB5
E
249 262Right-handed alpha
Helix 15
AB6
G
163 170Right-handed alpha
Helix 16
AB7
G
173 184Right-handed alpha
Helix 17
AB8
G
223 244Right-handed alpha
Helix 18
AB9
G
249 264Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 4WAN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 153first strand
Strand 2
A
216 221anti-parallel
Strand 3
A
186 190anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
148 153first strand
Strand 2
C
216 221anti-parallel
Strand 3
C
186 190anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
148 153first strand
Strand 2
E
216 221anti-parallel
Strand 3
E
186 190anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
148 153first strand
Strand 2
G
216 221anti-parallel
Strand 3
G
186 190anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il