Analysis of interatomic Contacts of Structural Units in PDB entry:
4WB0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WB0 entry

There are 3 chains in PDB entry 4WB0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 6THR 295
A
 PRO 297ASN 410
B
 ALA 5ARG 240
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 4WB0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 15Right-handed alpha
Helix 2
AA2
A
22 34Right-handed alpha
Helix 3
AA3
A
56 70Right-handed alpha
Helix 4
AA4
A
81 94Right-handed alpha
Helix 5
AA5
A
98 100Right-handed 310
Helix 6
AA6
A
109 122Right-handed alpha
Helix 7
AA7
A
139 149Right-handed alpha
Helix 8
AA8
A
168 179Right-handed alpha
Helix 9
AA9
A
200 214Right-handed alpha
Helix 10
AB1
A
231 236Right-handed alpha
Helix 11
AB2
A
236 245Right-handed alpha
Helix 12
AB3
A
261 264Right-handed 310
Helix 13
AB4
A
275 277Right-handed 310
Helix 14
AB5
A
278 292Right-handed alpha
Helix 15
AB6
A
298 311Right-handed alpha
Helix 16
AB7
A
311 343Right-handed alpha
Helix 17
AB8
A
349 355Right-handed alpha
Helix 18
AB9
A
365 375Right-handed alpha
Helix 19
AC1
A
388 390Right-handed 310
Helix 20
AC2
A
391 409Right-handed alpha
Helix 21
AC3
B
8 15Right-handed alpha
Helix 22
AC4
B
22 34Right-handed alpha
Helix 23
AC5
B
56 68Right-handed alpha
Helix 24
AC6
B
81 94Right-handed alpha
Helix 25
AC7
B
96 100Right-handed 310
Helix 26
AC8
B
109 122Right-handed alpha
Helix 27
AC9
B
139 150Right-handed alpha
Helix 28
AD1
B
168 179Right-handed alpha
Helix 29
AD2
B
200 215Right-handed alpha
Helix 30
AD3
B
231 236Right-handed alpha
Helix 31
AD4
B
236 245Right-handed alpha
Helix 32
AD5
B
275 292Right-handed alpha
Helix 33
AD6
B
299 311Right-handed alpha
Helix 34
AD7
B
311 343Right-handed alpha
Helix 35
AD8
B
350 355Right-handed alpha
Helix 36
AD9
B
365 375Right-handed alpha
Helix 37
AE1
B
388 390Right-handed 310
Helix 38
AE2
B
391 408Right-handed alpha
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There are 7 sheets in PDB entry 4WB0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 40first strand
Strand 2
A
377 378parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 108first strand
Strand 2
A
266 272anti-parallel
Strand 3
A
250 254anti-parallel
Strand 4
A
217 222parallel
Strand 5
A
184 188parallel
Strand 6
A
132 136parallel
Strand 7
A
154 158parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 161first strand
Strand 2
A
166 167anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
359 361first strand
Strand 2
A
384 386anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
39 40first strand
Strand 2
B
377 378parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
102 108first strand
Strand 2
B
266 272anti-parallel
Strand 3
B
250 254anti-parallel
Strand 4
B
217 222parallel
Strand 5
B
184 188parallel
Strand 6
B
132 136parallel
Strand 7
B
154 158parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
359 361first strand
Strand 2
B
384 386anti-parallel
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