Analysis of interatomic Contacts of Structural Units in PDB entry:
4WBE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WBE entry

There are 3 chains in PDB entry 4WBE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 132ASN 251
B
 ARG 132ASN 251
C
 ARG 133ASN 251
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 4WBE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
132 159Right-handed alpha
Helix 2
AA2
A
161 171Right-handed alpha
Helix 3
AA3
A
179 194Right-handed alpha
Helix 4
AA4
A
202 207Right-handed alpha
Helix 5
AA5
A
207 220Right-handed alpha
Helix 6
AA6
A
230 243Right-handed alpha
Helix 7
AA7
A
244 248Right-handed 310
Helix 8
AA8
B
133 159Right-handed alpha
Helix 9
AA9
B
161 171Right-handed alpha
Helix 10
AB1
B
179 194Right-handed alpha
Helix 11
AB2
B
202 207Right-handed alpha
Helix 12
AB3
B
207 220Right-handed alpha
Helix 13
AB4
B
230 243Right-handed alpha
Helix 14
AB5
B
244 248Right-handed 310
Helix 15
AB6
C
134 159Right-handed alpha
Helix 16
AB7
C
161 170Right-handed alpha
Helix 17
AB8
C
179 194Right-handed alpha
Helix 18
AB9
C
202 207Right-handed alpha
Helix 19
AC1
C
207 220Right-handed alpha
Helix 20
AC2
C
230 243Right-handed alpha
Helix 21
AC3
C
244 248Right-handed 310
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There are 3 sheets in PDB entry 4WBE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
224 225first strand
Strand 2
A
228 229anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
224 225first strand
Strand 2
B
228 229anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
224 225first strand
Strand 2
C
228 229anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il