Analysis of interatomic Contacts of Structural Units in PDB entry:
4WBQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WBQ entry

There are 2 chains in PDB entry 4WBQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 331GLU 531
B
 GLU 330LEU 530
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 4WBQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
361 364Right-handed 310
Helix 2
AA2
A
374 377Right-handed 310
Helix 3
AA3
A
388 390Right-handed 310
Helix 4
AA4
A
414 428Right-handed alpha
Helix 5
AA5
A
447 458Right-handed alpha
Helix 6
AA6
A
461 465Right-handed 310
Helix 7
AA7
A
474 481Right-handed alpha
Helix 8
AA8
A
484 498Right-handed alpha
Helix 9
AA9
A
506 530Right-handed alpha
Helix 10
AB1
B
361 364Right-handed 310
Helix 11
AB2
B
374 377Right-handed 310
Helix 12
AB3
B
415 427Right-handed alpha
Helix 13
AB4
B
447 458Right-handed alpha
Helix 14
AB5
B
461 465Right-handed 310
Helix 15
AB6
B
474 481Right-handed alpha
Helix 16
AB7
B
484 498Right-handed alpha
Helix 17
AB8
B
506 530Right-handed alpha
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There are 2 sheets in PDB entry 4WBQ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
411 413first strand
Strand 2
A
379 386parallel
Strand 3
A
346 359anti-parallel
Strand 4
A
334 343anti-parallel
Strand 5
A
441 445parallel
Strand 6
A
468 473parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
411 414first strand
Strand 2
B
379 387parallel
Strand 3
B
346 359anti-parallel
Strand 4
B
334 343anti-parallel
Strand 5
B
441 445parallel
Strand 6
B
468 473parallel
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