Analysis of interatomic Contacts of Structural Units in PDB entry:
4WBX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WBX entry

There is 1 chain in PDB entry 4WBX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 ARG 4ILE 382
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 16 helices in PDB entry 4WBX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
16 29Right-handed alpha
Helix 2
AA2
C
41 52Right-handed alpha
Helix 3
AA3
C
53 56Right-handed 310
Helix 4
AA4
C
64 78Right-handed alpha
Helix 5
AA5
C
88 94Right-handed alpha
Helix 6
AA6
C
94 104Right-handed alpha
Helix 7
AA7
C
130 137Right-handed alpha
Helix 8
AA8
C
151 169Right-handed alpha
Helix 9
AA9
C
179 184Right-handed alpha
Helix 10
AB1
C
192 196Right-handed 310
Helix 11
AB2
C
259 268Right-handed alpha
Helix 12
AB3
C
269 274Right-handed alpha
Helix 13
AB4
C
292 299Right-handed alpha
Helix 14
AB5
C
324 334Right-handed alpha
Helix 15
AB6
C
347 356Right-handed alpha
Helix 16
AB7
C
374 382Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 4WBX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
11 15first strand
Strand 2
C
186 190anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
58 61first strand
Strand 2
C
32 35parallel
Strand 3
C
82 86parallel
Strand 4
C
108 114parallel
Strand 5
C
172 178parallel
Strand 6
C
145 147parallel
Strand 7
C
319 321anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
276 277first strand
Strand 2
C
316 317anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
337 342first strand
Strand 2
C
361 366parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il