Analysis of interatomic Contacts of Structural Units in PDB entry:
4WC0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WC0 entry

There are 2 chains in PDB entry 4WC0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 382
B
 MET 1LYS 382
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 45 helices in PDB entry 4WC0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 9Right-handed alpha
Helix 2
AA2
A
17 25Right-handed alpha
Helix 3
AA3
A
39 52Right-handed alpha
Helix 4
AA4
A
96 103Right-handed alpha
Helix 5
AA5
A
106 110Right-handed 310
Helix 6
AA6
A
128 135Right-handed alpha
Helix 7
AA7
A
144 149Right-handed alpha
Helix 8
AA8
A
150 163Right-handed alpha
Helix 9
AA9
A
168 181Right-handed alpha
Helix 10
AB1
A
188 200Right-handed alpha
Helix 11
AB2
A
204 216Right-handed alpha
Helix 12
AB3
A
217 221Right-handed 310
Helix 13
AB4
A
228 249Right-handed alpha
Helix 14
AB5
A
256 265Right-handed alpha
Helix 15
AB6
A
269 280Right-handed alpha
Helix 16
AB7
A
283 295Right-handed alpha
Helix 17
AB8
A
296 306Right-handed alpha
Helix 18
AB9
A
309 318Right-handed alpha
Helix 19
AC1
A
321 329Right-handed alpha
Helix 20
AC2
A
334 344Right-handed alpha
Helix 21
AC3
A
345 348Right-handed 310
Helix 22
AC4
A
352 360Right-handed alpha
Helix 23
AC5
A
368 380Right-handed alpha
Helix 24
AC6
B
2 10Right-handed alpha
Helix 25
AC7
B
17 25Right-handed alpha
Helix 26
AC8
B
39 52Right-handed alpha
Helix 27
AC9
B
96 103Right-handed alpha
Helix 28
AD1
B
106 110Right-handed 310
Helix 29
AD2
B
128 135Right-handed alpha
Helix 30
AD3
B
144 149Right-handed alpha
Helix 31
AD4
B
150 164Right-handed alpha
Helix 32
AD5
B
168 181Right-handed alpha
Helix 33
AD6
B
188 201Right-handed alpha
Helix 34
AD7
B
204 215Right-handed alpha
Helix 35
AD8
B
216 222Right-handed alpha
Helix 36
AD9
B
228 249Right-handed alpha
Helix 37
AE1
B
256 265Right-handed alpha
Helix 38
AE2
B
269 280Right-handed alpha
Helix 39
AE3
B
283 294Right-handed alpha
Helix 40
AE4
B
296 306Right-handed alpha
Helix 41
AE5
B
309 318Right-handed alpha
Helix 42
AE6
B
321 328Right-handed alpha
Helix 43
AE7
B
334 344Right-handed alpha
Helix 44
AE8
B
345 348Right-handed 310
Helix 45
AE9
B
371 381Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 4WC0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 58first strand
Strand 2
A
63 68anti-parallel
Strand 3
A
71 77anti-parallel
Strand 4
A
31 37parallel
Strand 5
A
12 16anti-parallel
Strand 6
A
112 114anti-parallel
Strand 7
A
123 124anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 138first strand
Strand 2
A
166 167parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
56 58first strand
Strand 2
B
63 68anti-parallel
Strand 3
B
71 77anti-parallel
Strand 4
B
31 37parallel
Strand 5
B
12 16anti-parallel
Strand 6
B
112 114anti-parallel
Strand 7
B
123 124anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
137 138first strand
Strand 2
B
166 167parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il