Analysis of interatomic Contacts of Structural Units in PDB entry:
4WCJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WCJ entry

There is 1 chain in PDB entry 4WCJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 31ALA 278
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 4WCJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
70 84Right-handed alpha
Helix 2
AA2
A
90 99Right-handed alpha
Helix 3
AA3
A
117 123Right-handed alpha
Helix 4
AA4
A
123 131Right-handed alpha
Helix 5
AA5
A
141 144Right-handed 310
Helix 6
AA6
A
155 165Right-handed alpha
Helix 7
AA7
A
189 191Right-handed 310
Helix 8
AA8
A
194 214Right-handed alpha
Helix 9
AA9
A
223 226Right-handed 310
Helix 10
AB1
A
228 238Right-handed alpha
Helix 11
AB2
A
268 278Right-handed alpha
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There are 4 sheets in PDB entry 4WCJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 88first strand
Strand 2
A
107 115parallel
Strand 3
A
135 139parallel
Strand 4
A
168 172parallel
Strand 5
A
219 221parallel
Strand 6
A
242 245parallel
Strand 7
A
258 263parallel
Strand 8
A
37 43parallel
Strand 9
A
107 115parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 46first strand
Strand 2
A
68 69parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 148first strand
Strand 2
A
151 152anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
180 181first strand
Strand 2
A
186 187anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il