Analysis of interatomic Contacts of Structural Units in PDB entry:
4WD0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WD0 entry

There is 1 chain in PDB entry 4WD0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 6ARG 247
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 4WD0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 49Right-handed alpha
Helix 2
AA2
A
59 63Right-handed alpha
Helix 3
AA3
A
68 79Right-handed alpha
Helix 4
AA4
A
91 101Right-handed alpha
Helix 5
AA5
A
109 115Right-handed alpha
Helix 6
AA6
A
115 127Right-handed alpha
Helix 7
AA7
A
152 164Right-handed alpha
Helix 8
AA8
A
183 195Right-handed alpha
Helix 9
AA9
A
206 215Right-handed alpha
Helix 10
AB1
A
216 219Right-handed 310
Helix 11
AB2
A
227 232Right-handed alpha
Helix 12
AB3
A
236 245Right-handed alpha
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There are 2 sheets in PDB entry 4WD0. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
140 141first strand
Strand 2
A
130 137anti-parallel
Strand 3
A
168 172parallel
Strand 4
A
198 201parallel
Strand 5
A
221 226parallel
Strand 6
A
10 17parallel
Strand 7
A
53 58parallel
Strand 8
A
82 86parallel
Strand 9
A
105 108parallel
Strand 10
A
130 137parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 24first strand
Strand 2
A
35 37anti-parallel
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