Analysis of interatomic Contacts of Structural Units in PDB entry:
4WE3

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4WE3 entry

There are 4 chains in PDB entry 4WE3 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 6	HIS 358
B	VAL 7	ARG 349
C	VAL 7	ARG 349
D	VAL 8	HIS 358

There are 59 helices in PDB entry 4WE3. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	26	28	Right-handed 310
Helix 2	AA2	A	61	66	Right-handed alpha
Helix 3	AA3	A	120	122	Right-handed 310
Helix 4	AA4	A	135	140	Right-handed alpha
Helix 5	AA5	A	142	154	Right-handed alpha
Helix 6	AA6	A	171	185	Right-handed alpha
Helix 7	AA7	A	194	204	Right-handed alpha
Helix 8	AA8	A	214	216	Right-handed 310
Helix 9	AA9	A	218	227	Right-handed alpha
Helix 10	AB1	A	240	249	Right-handed alpha
Helix 11	AB2	A	277	282	Right-handed alpha
Helix 12	AB3	A	290	296	Right-handed 310
Helix 13	AB4	A	297	311	Right-handed alpha
Helix 14	AB5	A	326	336	Right-handed alpha
Helix 15	AB6	B	26	28	Right-handed 310
Helix 16	AB7	B	61	66	Right-handed alpha
Helix 17	AB8	B	120	122	Right-handed 310
Helix 18	AB9	B	133	138	Right-handed 310
Helix 19	AC1	B	142	154	Right-handed alpha
Helix 20	AC2	B	171	185	Right-handed alpha
Helix 21	AC3	B	194	204	Right-handed alpha
Helix 22	AC4	B	214	216	Right-handed 310
Helix 23	AC5	B	218	227	Right-handed alpha
Helix 24	AC6	B	240	249	Right-handed alpha
Helix 25	AC7	B	261	265	Right-handed 310
Helix 26	AC8	B	277	282	Right-handed alpha
Helix 27	AC9	B	290	296	Right-handed 310
Helix 28	AD1	B	297	311	Right-handed alpha
Helix 29	AD2	B	326	336	Right-handed alpha
Helix 30	AD3	C	26	28	Right-handed 310
Helix 31	AD4	C	61	66	Right-handed alpha
Helix 32	AD5	C	120	122	Right-handed 310
Helix 33	AD6	C	133	139	Right-handed 310
Helix 34	AD7	C	142	154	Right-handed alpha
Helix 35	AD8	C	171	185	Right-handed alpha
Helix 36	AD9	C	194	204	Right-handed alpha
Helix 37	AE1	C	214	216	Right-handed 310
Helix 38	AE2	C	218	227	Right-handed alpha
Helix 39	AE3	C	240	249	Right-handed alpha
Helix 40	AE4	C	261	265	Right-handed 310
Helix 41	AE5	C	277	282	Right-handed alpha
Helix 42	AE6	C	290	296	Right-handed 310
Helix 43	AE7	C	297	311	Right-handed alpha
Helix 44	AE8	C	326	336	Right-handed alpha
Helix 45	AE9	D	26	28	Right-handed 310
Helix 46	AF1	D	61	66	Right-handed alpha
Helix 47	AF2	D	120	122	Right-handed 310
Helix 48	AF3	D	133	139	Right-handed 310
Helix 49	AF4	D	142	154	Right-handed alpha
Helix 50	AF5	D	171	185	Right-handed alpha
Helix 51	AF6	D	194	204	Right-handed alpha
Helix 52	AF7	D	214	216	Right-handed 310
Helix 53	AF8	D	218	227	Right-handed alpha
Helix 54	AF9	D	240	249	Right-handed alpha
Helix 55	AG1	D	261	265	Right-handed 310
Helix 56	AG2	D	277	282	Right-handed alpha
Helix 57	AG3	D	290	296	Right-handed 310
Helix 58	AG4	D	297	311	Right-handed alpha
Helix 59	AG5	D	326	336	Right-handed alpha

There are 18 sheets in PDB entry 4WE3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	8	10	first strand
Strand 2	A	37	39	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	13	16	first strand
Strand 2	A	30	33	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	115	118	first strand
Strand 2	A	49	57	anti-parallel
Strand 3	A	85	95	anti-parallel
Strand 4	A	105	111	anti-parallel
Strand 5	A	124	126	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	115	118	first strand
Strand 2	A	49	57	anti-parallel
Strand 3	A	342	346	anti-parallel
Strand 4	A	318	322	parallel

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There are 12 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	209	212	first strand
Strand 2	A	187	192	parallel
Strand 3	A	163	166	parallel
Strand 4	A	231	236	parallel
Strand 5	A	250	258	parallel
Strand 6	A	285	288	parallel
Strand 7	B	285	288	anti-parallel
Strand 8	B	250	258	parallel
Strand 9	B	231	236	parallel
Strand 10	B	163	166	parallel
Strand 11	B	187	192	parallel
Strand 12	B	209	212	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	8	10	first strand
Strand 2	B	37	39	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	13	16	first strand
Strand 2	B	30	33	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	115	118	first strand
Strand 2	B	49	57	anti-parallel
Strand 3	B	85	95	anti-parallel
Strand 4	B	105	111	anti-parallel
Strand 5	B	124	126	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	115	118	first strand
Strand 2	B	49	57	anti-parallel
Strand 3	B	342	346	anti-parallel
Strand 4	B	318	322	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	8	10	first strand
Strand 2	C	37	39	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	13	16	first strand
Strand 2	C	30	33	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	115	118	first strand
Strand 2	C	49	57	anti-parallel
Strand 3	C	85	95	anti-parallel
Strand 4	C	105	111	anti-parallel
Strand 5	C	124	126	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	115	118	first strand
Strand 2	C	49	57	anti-parallel
Strand 3	C	342	346	anti-parallel
Strand 4	C	318	322	parallel

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There are 12 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	209	212	first strand
Strand 2	C	187	192	parallel
Strand 3	C	163	166	parallel
Strand 4	C	231	236	parallel
Strand 5	C	250	258	parallel
Strand 6	C	285	288	parallel
Strand 7	D	285	288	anti-parallel
Strand 8	D	250	258	parallel
Strand 9	D	231	236	parallel
Strand 10	D	163	166	parallel
Strand 11	D	187	192	parallel
Strand 12	D	209	212	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	9	10	first strand
Strand 2	D	37	38	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	13	16	first strand
Strand 2	D	30	33	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	115	118	first strand
Strand 2	D	49	57	anti-parallel
Strand 3	D	85	95	anti-parallel
Strand 4	D	105	111	anti-parallel
Strand 5	D	124	126	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	115	118	first strand
Strand 2	D	49	57	anti-parallel
Strand 3	D	342	346	anti-parallel
Strand 4	D	318	322	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4WE3

Analysis of interatomic Contacts of Structural Units in PDB entry:
4WE3