Analysis of interatomic Contacts of Structural Units in PDB entry:
4WF2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WF2 entry

There is 1 chain in PDB entry 4WF2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 3GLU 320
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 4WF2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 15Right-handed alpha
Helix 2
AA2
A
22 30Right-handed alpha
Helix 3
AA3
A
32 46Right-handed alpha
Helix 4
AA4
A
68 75Right-handed alpha
Helix 5
AA5
A
89 97Right-handed alpha
Helix 6
AA6
A
146 164Right-handed alpha
Helix 7
AA7
A
226 230Right-handed 310
Helix 8
AA8
A
234 257Right-handed alpha
Helix 9
AA9
A
258 260Right-handed 310
Helix 10
AB1
A
261 267Right-handed alpha
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There are 3 sheets in PDB entry 4WF2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 21first strand
Strand 2
A
57 59anti-parallel
Strand 3
A
51 53anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 87first strand
Strand 2
A
106 112parallel
Strand 3
A
131 139anti-parallel
Strand 4
A
199 207anti-parallel
Strand 5
A
182 191anti-parallel
Strand 6
A
176 179anti-parallel
Strand 7
A
170 172anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
305 309first strand
Strand 2
A
298 302anti-parallel
Strand 3
A
283 292anti-parallel
Strand 4
A
275 280anti-parallel
Strand 5
A
313 316anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il