Analysis of interatomic Contacts of Structural Units in PDB entry:
4WGG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WGG entry

There are 2 chains in PDB entry 4WGG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 7HIS 358
B
 VAL 7HIS 358
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 4WGG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
26 28Right-handed 310
Helix 2
AA2
A
59 67Right-handed 310
Helix 3
AA3
A
120 122Right-handed 310
Helix 4
AA4
A
133 138Right-handed 310
Helix 5
AA5
A
142 154Right-handed alpha
Helix 6
AA6
A
171 185Right-handed alpha
Helix 7
AA7
A
194 204Right-handed alpha
Helix 8
AA8
A
214 216Right-handed 310
Helix 9
AA9
A
218 227Right-handed alpha
Helix 10
AB1
A
240 249Right-handed alpha
Helix 11
AB2
A
261 265Right-handed 310
Helix 12
AB3
A
277 282Right-handed alpha
Helix 13
AB4
A
290 296Right-handed 310
Helix 14
AB5
A
297 311Right-handed alpha
Helix 15
AB6
A
326 335Right-handed alpha
Helix 16
AB7
B
26 28Right-handed 310
Helix 17
AB8
B
59 67Right-handed 310
Helix 18
AB9
B
120 122Right-handed 310
Helix 19
AC1
B
133 138Right-handed 310
Helix 20
AC2
B
142 154Right-handed alpha
Helix 21
AC3
B
171 184Right-handed alpha
Helix 22
AC4
B
194 203Right-handed alpha
Helix 23
AC5
B
214 216Right-handed 310
Helix 24
AC6
B
218 227Right-handed alpha
Helix 25
AC7
B
240 249Right-handed alpha
Helix 26
AC8
B
261 265Right-handed 310
Helix 27
AC9
B
277 282Right-handed alpha
Helix 28
AD1
B
290 296Right-handed 310
Helix 29
AD2
B
297 312Right-handed alpha
Helix 30
AD3
B
326 336Right-handed alpha
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There are 9 sheets in PDB entry 4WGG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 10first strand
Strand 2
A
37 39anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 16first strand
Strand 2
A
30 33anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 118first strand
Strand 2
A
49 57anti-parallel
Strand 3
A
85 95anti-parallel
Strand 4
A
105 111anti-parallel
Strand 5
A
124 126anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 118first strand
Strand 2
A
49 57anti-parallel
Strand 3
A
342 346anti-parallel
Strand 4
A
318 322parallel
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There are 12 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
209 212first strand
Strand 2
A
187 192parallel
Strand 3
A
163 167parallel
Strand 4
A
231 236parallel
Strand 5
A
250 258parallel
Strand 6
A
285 288parallel
Strand 7
B
285 288anti-parallel
Strand 8
B
250 258parallel
Strand 9
B
231 236parallel
Strand 10
B
163 166parallel
Strand 11
B
187 192parallel
Strand 12
B
209 212parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
8 10first strand
Strand 2
B
37 39anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 16first strand
Strand 2
B
30 33anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
115 118first strand
Strand 2
B
49 57anti-parallel
Strand 3
B
85 95anti-parallel
Strand 4
B
105 111anti-parallel
Strand 5
B
124 126anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
115 118first strand
Strand 2
B
49 57anti-parallel
Strand 3
B
342 346anti-parallel
Strand 4
B
318 322parallel
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