Analysis of interatomic Contacts of Structural Units in PDB entry:
4WGH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WGH entry

There is 1 chain in PDB entry 4WGH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 2VAL 284
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 4WGH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 29Right-handed 310
Helix 2
AA2
A
30 44Right-handed alpha
Helix 3
AA3
A
54 57Right-handed 310
Helix 4
AA4
A
58 68Right-handed alpha
Helix 5
AA5
A
71 75Right-handed 310
Helix 6
AA6
A
82 86Right-handed 310
Helix 7
AA7
A
90 103Right-handed alpha
Helix 8
AA8
A
119 133Right-handed alpha
Helix 9
AA9
A
145 155Right-handed alpha
Helix 10
AB1
A
157 161Right-handed 310
Helix 11
AB2
A
173 177Right-handed 310
Helix 12
AB3
A
178 186Right-handed alpha
Helix 13
AB4
A
209 219Right-handed alpha
Helix 14
AB5
A
222 232Right-handed alpha
Helix 15
AB6
A
245 255Right-handed alpha
Helix 16
AB7
A
256 258Right-handed 310
Helix 17
AB8
A
261 272Right-handed alpha
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There are 2 sheets in PDB entry 4WGH. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 8first strand
Strand 2
A
11 15anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 20first strand
Strand 2
A
48 50parallel
Strand 3
A
76 81parallel
Strand 4
A
109 112parallel
Strand 5
A
139 142parallel
Strand 6
A
164 167parallel
Strand 7
A
190 193parallel
Strand 8
A
237 239parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il