Analysis of interatomic Contacts of Structural Units in PDB entry:
4WHJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WHJ entry

There are 2 chains in PDB entry 4WHJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 93SER 711
B
 TYR 93SER 711
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 4WHJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
93 110Right-handed alpha
Helix 2
AA2
A
130 140Right-handed alpha
Helix 3
AA3
A
182 199Right-handed alpha
Helix 4
AA4
A
241 254Right-handed alpha
Helix 5
AA5
A
269 272Right-handed 310
Helix 6
AA6
A
273 283Right-handed alpha
Helix 7
AA7
A
301 313Right-handed alpha
Helix 8
AA8
A
338 353Right-handed alpha
Helix 9
AA9
A
355 362Right-handed alpha
Helix 10
AB1
A
369 407Right-handed alpha
Helix 11
AB2
A
415 439Right-handed alpha
Helix 12
AB3
A
449 484Right-handed alpha
Helix 13
AB4
A
499 511Right-handed alpha
Helix 14
AB5
A
512 539Right-handed alpha
Helix 15
AB6
A
542 578Right-handed alpha
Helix 16
AB7
A
624 654Right-handed alpha
Helix 17
AB8
A
654 669Right-handed alpha
Helix 18
AB9
A
670 673Right-handed 310
Helix 19
AC1
A
674 679Right-handed alpha
Helix 20
AC2
A
684 711Right-handed alpha
Helix 21
AC3
B
94 110Right-handed alpha
Helix 22
AC4
B
130 140Right-handed alpha
Helix 23
AC5
B
182 199Right-handed alpha
Helix 24
AC6
B
241 254Right-handed alpha
Helix 25
AC7
B
269 272Right-handed 310
Helix 26
AC8
B
273 283Right-handed alpha
Helix 27
AC9
B
301 313Right-handed alpha
Helix 28
AD1
B
338 353Right-handed alpha
Helix 29
AD2
B
355 361Right-handed alpha
Helix 30
AD3
B
369 406Right-handed alpha
Helix 31
AD4
B
418 439Right-handed alpha
Helix 32
AD5
B
449 484Right-handed alpha
Helix 33
AD6
B
498 511Right-handed alpha
Helix 34
AD7
B
512 539Right-handed alpha
Helix 35
AD8
B
542 578Right-handed alpha
Helix 36
AD9
B
624 654Right-handed alpha
Helix 37
AE1
B
654 669Right-handed alpha
Helix 38
AE2
B
670 673Right-handed 310
Helix 39
AE3
B
674 679Right-handed alpha
Helix 40
AE4
B
683 711Right-handed alpha
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There are 2 sheets in PDB entry 4WHJ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 179first strand
Strand 2
A
167 172anti-parallel
Strand 3
A
209 214anti-parallel
Strand 4
A
155 160parallel
Strand 5
A
221 225anti-parallel
Strand 6
A
120 125parallel
Strand 7
A
258 265parallel
Strand 8
A
289 294parallel
Strand 9
A
322 324parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
176 178first strand
Strand 2
B
167 172anti-parallel
Strand 3
B
209 214anti-parallel
Strand 4
B
155 160parallel
Strand 5
B
221 225anti-parallel
Strand 6
B
120 125parallel
Strand 7
B
258 265parallel
Strand 8
B
289 294parallel
Strand 9
B
322 324parallel
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