Analysis of interatomic Contacts of Structural Units in PDB entry:
4WHV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4WHV entry

There are 12 chains in PDB entry 4WHV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	LEU 4	ASN 150
C	GLN 345	LYS 480
D	PRO 342	LYS 480
E	LEU 4	ASN 150
H	LEU 4	ASN 150
I	GLU 380	LYS 480
J	GLU 380	LYS 480
K	LEU 4	ASN 150
A	MET 1	LEU 71
F	MET 1	LEU 71
G	MET 1	LEU 71
L	MET 1	LEU 71

There are 48 helices in PDB entry 4WHV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	5	18	Right-handed alpha
Helix 2	AA2	B	88	92	Right-handed 310
Helix 3	AA3	B	100	114	Right-handed alpha
Helix 4	AA4	B	124	132	Right-handed alpha
Helix 5	AA5	B	132	148	Right-handed alpha
Helix 6	AA6	C	346	399	Right-handed alpha
Helix 7	AA7	C	424	431	Right-handed alpha
Helix 8	AA8	C	450	462	Right-handed alpha
Helix 9	AA9	C	465	480	Right-handed alpha
Helix 10	AB1	D	343	397	Right-handed alpha
Helix 11	AB2	D	424	434	Right-handed alpha
Helix 12	AB3	D	450	462	Right-handed alpha
Helix 13	AB4	D	465	480	Right-handed alpha
Helix 14	AB5	E	5	18	Right-handed alpha
Helix 15	AB6	E	88	92	Right-handed 310
Helix 16	AB7	E	100	114	Right-handed alpha
Helix 17	AB8	E	124	132	Right-handed alpha
Helix 18	AB9	E	132	148	Right-handed alpha
Helix 19	AC1	H	5	18	Right-handed alpha
Helix 20	AC2	H	88	92	Right-handed 310
Helix 21	AC3	H	100	114	Right-handed alpha
Helix 22	AC4	H	124	132	Right-handed alpha
Helix 23	AC5	H	132	148	Right-handed alpha
Helix 24	AC6	I	381	399	Right-handed alpha
Helix 25	AC7	I	424	431	Right-handed alpha
Helix 26	AC8	I	450	462	Right-handed alpha
Helix 27	AC9	I	465	480	Right-handed alpha
Helix 28	AD1	J	381	397	Right-handed alpha
Helix 29	AD2	J	424	434	Right-handed alpha
Helix 30	AD3	J	450	462	Right-handed alpha
Helix 31	AD4	J	465	480	Right-handed alpha
Helix 32	AD5	K	5	18	Right-handed alpha
Helix 33	AD6	K	88	92	Right-handed 310
Helix 34	AD7	K	100	114	Right-handed alpha
Helix 35	AD8	K	124	132	Right-handed alpha
Helix 36	AD9	K	132	148	Right-handed alpha
Helix 37	AE1	A	22	35	Right-handed alpha
Helix 38	AE2	A	37	41	Right-handed 310
Helix 39	AE3	A	56	60	Right-handed 310
Helix 40	AE4	F	22	35	Right-handed alpha
Helix 41	AE5	F	37	41	Right-handed 310
Helix 42	AE6	F	56	60	Right-handed 310
Helix 43	AE7	G	22	35	Right-handed alpha
Helix 44	AE8	G	37	41	Right-handed 310
Helix 45	AE9	G	56	60	Right-handed 310
Helix 46	AF1	L	22	35	Right-handed alpha
Helix 47	AF2	L	37	41	Right-handed 310
Helix 48	AF3	L	56	60	Right-handed 310

There are 12 sheets in PDB entry 4WHV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	23	27	first strand
Strand 2	B	34	40	anti-parallel
Strand 3	B	51	57	anti-parallel
Strand 4	B	68	71	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	421	423	first strand
Strand 2	C	413	416	anti-parallel
Strand 3	C	447	449	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	421	423	first strand
Strand 2	D	413	416	anti-parallel
Strand 3	D	447	449	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	23	27	first strand
Strand 2	E	34	40	anti-parallel
Strand 3	E	51	57	anti-parallel
Strand 4	E	68	71	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	23	27	first strand
Strand 2	H	34	40	anti-parallel
Strand 3	H	51	57	anti-parallel
Strand 4	H	68	71	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	421	423	first strand
Strand 2	I	413	416	anti-parallel
Strand 3	I	447	449	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	421	423	first strand
Strand 2	J	413	416	anti-parallel
Strand 3	J	447	449	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	23	27	first strand
Strand 2	K	34	40	anti-parallel
Strand 3	K	51	57	anti-parallel
Strand 4	K	68	71	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	12	16	first strand
Strand 2	A	2	6	anti-parallel
Strand 3	A	66	70	parallel
Strand 4	A	42	45	anti-parallel
Strand 5	A	48	49	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	12	16	first strand
Strand 2	F	2	6	anti-parallel
Strand 3	F	66	70	parallel
Strand 4	F	42	45	anti-parallel
Strand 5	F	48	49	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	12	16	first strand
Strand 2	G	2	6	anti-parallel
Strand 3	G	66	70	parallel
Strand 4	G	42	45	anti-parallel
Strand 5	G	48	49	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	12	16	first strand
Strand 2	L	2	6	anti-parallel
Strand 3	L	66	70	parallel
Strand 4	L	42	45	anti-parallel
Strand 5	L	48	49	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4WHV

Analysis of interatomic Contacts of Structural Units in PDB entry:
4WHV