Analysis of interatomic Contacts of Structural Units in PDB entry:
4WIW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4WIW entry

There are 4 chains in PDB entry 4WIW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 341	ARG 688
B	ASN 341	ARG 688
C	ASN 341	ARG 688
D	SER 340	PRO 572

There are 92 helices in PDB entry 4WIW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	354	363	Right-handed alpha
Helix 2	AA2	A	368	372	Right-handed 310
Helix 3	AA3	A	399	411	Right-handed alpha
Helix 4	AA4	A	422	432	Right-handed alpha
Helix 5	AA5	A	432	449	Right-handed alpha
Helix 6	AA6	A	475	493	Right-handed alpha
Helix 7	AA7	A	509	513	Right-handed 310
Helix 8	AA8	A	516	522	Right-handed alpha
Helix 9	AA9	A	546	560	Right-handed alpha
Helix 10	AB1	A	563	565	Right-handed 310
Helix 11	AB2	A	597	608	Right-handed alpha
Helix 12	AB3	A	644	653	Right-handed alpha
Helix 13	AB4	A	653	659	Right-handed alpha
Helix 14	AB5	A	667	671	Right-handed 310
Helix 15	AB6	A	672	688	Right-handed alpha
Helix 16	AB7	B	354	364	Right-handed alpha
Helix 17	AB8	B	368	372	Right-handed 310
Helix 18	AB9	B	399	411	Right-handed alpha
Helix 19	AC1	B	422	431	Right-handed alpha
Helix 20	AC2	B	432	449	Right-handed alpha
Helix 21	AC3	B	475	492	Right-handed alpha
Helix 22	AC4	B	509	513	Right-handed 310
Helix 23	AC5	B	516	523	Right-handed alpha
Helix 24	AC6	B	546	560	Right-handed alpha
Helix 25	AC7	B	563	565	Right-handed 310
Helix 26	AC8	B	597	608	Right-handed alpha
Helix 27	AC9	B	644	653	Right-handed alpha
Helix 28	AD1	B	653	659	Right-handed alpha
Helix 29	AD2	B	667	671	Right-handed 310
Helix 30	AD3	B	672	688	Right-handed alpha
Helix 31	AD4	C	354	364	Right-handed alpha
Helix 32	AD5	C	368	372	Right-handed 310
Helix 33	AD6	C	399	412	Right-handed alpha
Helix 34	AD7	C	422	432	Right-handed alpha
Helix 35	AD8	C	432	449	Right-handed alpha
Helix 36	AD9	C	475	493	Right-handed alpha
Helix 37	AE1	C	509	513	Right-handed 310
Helix 38	AE2	C	516	521	Right-handed alpha
Helix 39	AE3	C	546	560	Right-handed alpha
Helix 40	AE4	C	563	565	Right-handed 310
Helix 41	AE5	C	597	609	Right-handed alpha
Helix 42	AE6	C	644	652	Right-handed alpha
Helix 43	AE7	C	653	659	Right-handed alpha
Helix 44	AE8	C	667	671	Right-handed 310
Helix 45	AE9	C	672	688	Right-handed alpha
Helix 46	AF1	D	354	364	Right-handed alpha
Helix 47	AF2	D	368	372	Right-handed 310
Helix 48	AF3	D	399	411	Right-handed alpha
Helix 49	AF4	D	423	432	Right-handed alpha
Helix 50	AF5	D	432	450	Right-handed alpha
Helix 51	AF6	D	475	492	Right-handed alpha
Helix 52	AF7	D	509	513	Right-handed 310
Helix 53	AF8	D	516	522	Right-handed alpha
Helix 54	AF9	D	546	560	Right-handed alpha
Helix 55	AG1	D	563	565	Right-handed 310
Helix 56	AG2	D	597	608	Right-handed alpha
Helix 57	AG3	D	633	635	Right-handed 310
Helix 58	AG4	D	644	653	Right-handed alpha
Helix 59	AG5	D	653	658	Right-handed alpha
Helix 60	AG6	D	667	671	Right-handed 310
Helix 61	AG7	D	672	688	Right-handed alpha
Helix 62	AG8	E	354	363	Right-handed alpha
Helix 63	AG9	E	368	372	Right-handed 310
Helix 64	AH1	E	399	411	Right-handed alpha
Helix 65	AH2	E	422	432	Right-handed alpha
Helix 66	AH3	E	432	449	Right-handed alpha
Helix 67	AH4	E	475	491	Right-handed alpha
Helix 68	AH5	E	492	494	Right-handed 310
Helix 69	AH6	E	509	513	Right-handed 310
Helix 70	AH7	E	516	522	Right-handed alpha
Helix 71	AH8	E	546	560	Right-handed alpha
Helix 72	AH9	E	597	608	Right-handed alpha
Helix 73	AI1	E	633	635	Right-handed 310
Helix 74	AI2	E	644	653	Right-handed alpha
Helix 75	AI3	E	653	659	Right-handed alpha
Helix 76	AI4	E	667	671	Right-handed 310
Helix 77	AI5	E	672	688	Right-handed alpha
Helix 78	AI6	F	354	363	Right-handed alpha
Helix 79	AI7	F	368	372	Right-handed 310
Helix 80	AI8	F	399	411	Right-handed alpha
Helix 81	AI9	F	422	432	Right-handed alpha
Helix 82	AJ1	F	432	451	Right-handed alpha
Helix 83	AJ2	F	475	493	Right-handed alpha
Helix 84	AJ3	F	509	513	Right-handed 310
Helix 85	AJ4	F	516	523	Right-handed alpha
Helix 86	AJ5	F	546	560	Right-handed alpha
Helix 87	AJ6	F	563	565	Right-handed 310
Helix 88	AJ7	F	597	608	Right-handed alpha
Helix 89	AJ8	F	644	653	Right-handed alpha
Helix 90	AJ9	F	653	658	Right-handed alpha
Helix 91	AK1	F	667	671	Right-handed 310
Helix 92	AK2	F	672	688	Right-handed alpha

There are 18 sheets in PDB entry 4WIW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	414	415	first strand
Strand 2	A	375	378	parallel
Strand 3	A	344	349	parallel
Strand 4	A	662	666	parallel
Strand 5	A	567	572	parallel
Strand 6	A	526	529	parallel
Strand 7	A	496	501	parallel
Strand 8	A	454	459	parallel
Strand 9	A	418	421	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	381	384	first strand
Strand 2	A	390	392	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	589	596	first strand
Strand 2	A	575	583	anti-parallel
Strand 3	A	637	641	anti-parallel
Strand 4	A	625	631	anti-parallel
Strand 5	A	613	615	anti-parallel

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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	414	415	first strand
Strand 2	B	375	378	parallel
Strand 3	B	344	349	parallel
Strand 4	B	662	663	parallel
Strand 5	B	567	569	parallel
Strand 6	B	526	529	parallel
Strand 7	B	496	501	parallel
Strand 8	B	454	459	parallel
Strand 9	B	418	421	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	381	384	first strand
Strand 2	B	390	392	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	589	596	first strand
Strand 2	B	575	583	anti-parallel
Strand 3	B	637	641	anti-parallel
Strand 4	B	625	631	anti-parallel
Strand 5	B	613	615	anti-parallel

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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	414	415	first strand
Strand 2	C	375	378	parallel
Strand 3	C	344	349	parallel
Strand 4	C	662	663	parallel
Strand 5	C	567	569	parallel
Strand 6	C	526	529	parallel
Strand 7	C	496	501	parallel
Strand 8	C	454	459	parallel
Strand 9	C	418	421	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	381	384	first strand
Strand 2	C	390	392	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	589	596	first strand
Strand 2	C	575	583	anti-parallel
Strand 3	C	637	641	anti-parallel
Strand 4	C	625	631	anti-parallel
Strand 5	C	613	615	anti-parallel

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There are 9 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	414	415	first strand
Strand 2	D	375	378	parallel
Strand 3	D	344	349	parallel
Strand 4	D	662	666	parallel
Strand 5	D	567	572	parallel
Strand 6	D	526	529	parallel
Strand 7	D	496	501	parallel
Strand 8	D	454	460	parallel
Strand 9	D	418	422	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	381	384	first strand
Strand 2	D	390	392	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	589	596	first strand
Strand 2	D	575	583	anti-parallel
Strand 3	D	637	641	anti-parallel
Strand 4	D	625	631	anti-parallel
Strand 5	D	613	615	anti-parallel

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There are 9 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	414	415	first strand
Strand 2	E	375	378	parallel
Strand 3	E	344	349	parallel
Strand 4	E	662	663	parallel
Strand 5	E	567	569	parallel
Strand 6	E	526	529	parallel
Strand 7	E	496	501	parallel
Strand 8	E	454	459	parallel
Strand 9	E	418	421	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	381	384	first strand
Strand 2	E	390	392	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	589	596	first strand
Strand 2	E	575	583	anti-parallel
Strand 3	E	637	641	anti-parallel
Strand 4	E	625	631	anti-parallel
Strand 5	E	613	615	anti-parallel

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There are 9 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	414	415	first strand
Strand 2	F	375	378	parallel
Strand 3	F	344	349	parallel
Strand 4	F	662	663	parallel
Strand 5	F	567	569	parallel
Strand 6	F	526	529	parallel
Strand 7	F	496	501	parallel
Strand 8	F	454	459	parallel
Strand 9	F	418	421	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	381	384	first strand
Strand 2	F	390	392	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	589	596	first strand
Strand 2	F	575	583	anti-parallel
Strand 3	F	637	641	anti-parallel
Strand 4	F	625	631	anti-parallel
Strand 5	F	613	615	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4WIW

Analysis of interatomic Contacts of Structural Units in PDB entry:
4WIW