Analysis of interatomic Contacts of Structural Units in PDB entry:
4WJ0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WJ0 entry

There are 2 chains in PDB entry 4WJ0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3VAL 319
B
 LYS 4ALA 302
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 4WJ0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
49 59Right-handed alpha
Helix 2
AA2
A
84 97Right-handed alpha
Helix 3
AA3
A
97 123Right-handed alpha
Helix 4
AA4
A
128 131Right-handed 310
Helix 5
AA5
A
132 139Right-handed alpha
Helix 6
AA6
A
141 161Right-handed alpha
Helix 7
AA7
A
162 164Right-handed 310
Helix 8
AA8
A
165 169Right-handed 310
Helix 9
AA9
A
180 203Right-handed alpha
Helix 10
AB1
A
221 235Right-handed alpha
Helix 11
AB2
A
235 246Right-handed alpha
Helix 12
AB3
A
250 252Right-handed 310
Helix 13
AB4
A
264 280Right-handed alpha
Helix 14
AB5
A
293 310Right-handed alpha
Helix 15
AB6
B
49 59Right-handed alpha
Helix 16
AB7
B
86 97Right-handed alpha
Helix 17
AB8
B
97 123Right-handed alpha
Helix 18
AB9
B
128 131Right-handed 310
Helix 19
AC1
B
132 139Right-handed alpha
Helix 20
AC2
B
141 161Right-handed alpha
Helix 21
AC3
B
162 164Right-handed 310
Helix 22
AC4
B
165 169Right-handed 310
Helix 23
AC5
B
180 203Right-handed alpha
Helix 24
AC6
B
215 219Right-handed 310
Helix 25
AC7
B
221 235Right-handed alpha
Helix 26
AC8
B
235 246Right-handed alpha
Helix 27
AC9
B
250 252Right-handed 310
Helix 28
AD1
B
264 280Right-handed alpha
Helix 29
AD2
B
293 310Right-handed alpha
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There are 5 sheets in PDB entry 4WJ0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 8first strand
Strand 2
A
37 42parallel
Strand 3
A
62 66parallel
Strand 4
A
72 78anti-parallel
Strand 5
B
72 78anti-parallel
Strand 6
B
62 66anti-parallel
Strand 7
B
39 42parallel
Strand 8
B
6 8parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 32first strand
Strand 2
A
20 24anti-parallel
Strand 3
A
12 17anti-parallel
Strand 4
A
46 48parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
254 256first strand
Strand 2
A
261 263anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 31first strand
Strand 2
B
21 24anti-parallel
Strand 3
B
12 16anti-parallel
Strand 4
B
46 48parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
254 256first strand
Strand 2
B
261 263anti-parallel
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