Analysis of interatomic Contacts of Structural Units in PDB entry:
4WJ7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WJ7 entry

There are 8 chains in PDB entry 4WJ7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 55TYR 221
B
 SER 60TYR 221
C
 ASP 61VAL 220
D
 ILE 63PHE 217
W
 VAL 244GLY 254
X
 VAL 244LEU 255
Y
 VAL 244GLY 254
Z
 VAL 244GLY 254
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 9 helices in PDB entry 4WJ7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
84 98Right-handed alpha
Helix 2
AA2
A
202 220Right-handed alpha
Helix 3
AA3
B
84 98Right-handed alpha
Helix 4
AA4
B
202 218Right-handed alpha
Helix 5
AA5
C
84 98Right-handed alpha
Helix 6
AA6
C
106 108Right-handed 310
Helix 7
AA7
C
202 218Right-handed alpha
Helix 8
AA8
D
84 98Right-handed alpha
Helix 9
AA9
D
202 217Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 4WJ7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 135first strand
Strand 2
A
119 124anti-parallel
Strand 3
A
110 115anti-parallel
Strand 4
A
63 76anti-parallel
Strand 5
A
193 200anti-parallel
Strand 6
A
151 157anti-parallel
Strand 7
A
139 146anti-parallel
Strand 8
W
246 249anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
130 135first strand
Strand 2
B
119 124anti-parallel
Strand 3
B
111 115anti-parallel
Strand 4
B
63 76anti-parallel
Strand 5
B
193 200anti-parallel
Strand 6
B
151 157anti-parallel
Strand 7
B
139 146anti-parallel
Strand 8
X
246 249anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
130 135first strand
Strand 2
C
119 124anti-parallel
Strand 3
C
110 115anti-parallel
Strand 4
C
63 76anti-parallel
Strand 5
C
193 200anti-parallel
Strand 6
C
151 157anti-parallel
Strand 7
C
139 146anti-parallel
Strand 8
Y
246 249anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
130 135first strand
Strand 2
D
119 124anti-parallel
Strand 3
D
110 115anti-parallel
Strand 4
D
64 76anti-parallel
Strand 5
D
193 200anti-parallel
Strand 6
D
151 157anti-parallel
Strand 7
D
139 146anti-parallel
Strand 8
Z
246 249anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il