Analysis of interatomic Contacts of Structural Units in PDB entry:
4WJI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WJI entry

There is 1 chain in PDB entry 4WJI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2THR 294
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 4WJI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 28Right-handed alpha
Helix 2
AA2
A
39 50Right-handed alpha
Helix 3
AA3
A
58 63Right-handed alpha
Helix 4
AA4
A
74 76Right-handed 310
Helix 5
AA5
A
77 86Right-handed alpha
Helix 6
AA6
A
87 89Right-handed 310
Helix 7
AA7
A
102 110Right-handed alpha
Helix 8
AA8
A
132 136Right-handed 310
Helix 9
AA9
A
155 169Right-handed alpha
Helix 10
AB1
A
177 189Right-handed alpha
Helix 11
AB2
A
189 205Right-handed alpha
Helix 12
AB3
A
210 217Right-handed alpha
Helix 13
AB4
A
218 220Right-handed 310
Helix 14
AB5
A
221 229Right-handed alpha
Helix 15
AB6
A
232 243Right-handed alpha
Helix 16
AB7
A
243 267Right-handed alpha
Helix 17
AB8
A
269 280Right-handed alpha
Helix 18
AB9
A
280 291Right-handed alpha
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There are 2 sheets in PDB entry 4WJI. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 56first strand
Strand 2
A
30 36parallel
Strand 3
A
5 11parallel
Strand 4
A
68 71parallel
Strand 5
A
94 97parallel
Strand 6
A
118 119parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 124first strand
Strand 2
A
145 148anti-parallel
Strand 3
A
172 175parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il