Analysis of interatomic Contacts of Structural Units in PDB entry:
4WJS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WJS entry

There is 1 chain in PDB entry 4WJS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 33ASN 517
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 4WJS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
58 60Right-handed 310
Helix 2
AA2
A
61 73Right-handed alpha
Helix 3
AA3
A
76 80Right-handed 310
Helix 4
AA4
A
102 110Right-handed alpha
Helix 5
AA5
A
242 246Right-handed 310
Helix 6
AA6
A
331 337Right-handed alpha
Helix 7
AA7
A
349 365Right-handed alpha
Helix 8
AA8
A
388 393Right-handed alpha
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There are 10 sheets in PDB entry 4WJS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 56first strand
Strand 2
A
36 42anti-parallel
Strand 3
A
120 126parallel
Strand 4
A
83 88anti-parallel
Strand 5
A
95 96anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 142first strand
Strand 2
A
512 516anti-parallel
Strand 3
A
502 507anti-parallel
Strand 4
A
491 496anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 154first strand
Strand 2
A
161 166anti-parallel
Strand 3
A
171 175anti-parallel
Strand 4
A
180 185anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
192 197first strand
Strand 2
A
204 208anti-parallel
Strand 3
A
213 216anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
235 240first strand
Strand 2
A
252 257anti-parallel
Strand 3
A
262 266anti-parallel
Strand 4
A
271 276anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
283 288first strand
Strand 2
A
293 298anti-parallel
Strand 3
A
303 307anti-parallel
Strand 4
A
312 317anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
324 329first strand
Strand 2
A
375 379anti-parallel
Strand 3
A
384 387anti-parallel
Strand 4
A
398 400anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
366 367first strand
Strand 2
A
370 371anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
407 412first strand
Strand 2
A
418 423anti-parallel
Strand 3
A
428 432anti-parallel
Strand 4
A
438 442anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
449 454first strand
Strand 2
A
460 465anti-parallel
Strand 3
A
470 474anti-parallel
Strand 4
A
479 484anti-parallel
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