Analysis of interatomic Contacts of Structural Units in PDB entry:
4WJV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WJV entry

There are 4 chains in PDB entry 4WJV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 138HIS 515
B
ALA 138HIS 515
C
ALA 138HIS 515
D
ALA 138LYS 285
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 90 helices in PDB entry 4WJV. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
239 243Right-handed 310
Helix 2
AA2
A
332 337Right-handed alpha
Helix 3
AA3
A
348 365Right-handed alpha
Helix 4
AA4
B
239 243Right-handed 310
Helix 5
AA5
B
332 337Right-handed alpha
Helix 6
AA6
B
348 365Right-handed alpha
Helix 7
AA7
C
239 243Right-handed 310
Helix 8
AA8
C
332 337Right-handed alpha
Helix 9
AA9
C
348 365Right-handed alpha
Helix 10
AB1
D
239 243Right-handed 310
Helix 11
AB2
D
332 337Right-handed alpha
Helix 12
AB3
D
348 365Right-handed alpha
Helix 13
AB4
E
26 42Right-handed alpha
Helix 14
AB5
E
52 61Right-handed alpha
Helix 15
AB6
E
62 65Right-handed 310
Helix 16
AB7
E
76 83Right-handed alpha
Helix 17
AB8
E
92 97Right-handed alpha
Helix 18
AB9
E
100 107Right-handed alpha
Helix 19
AC1
E
140 151Right-handed alpha
Helix 20
AC2
E
163 172Right-handed alpha
Helix 21
AC3
E
173 175Right-handed 310
Helix 22
AC4
E
195 211Right-handed alpha
Helix 23
AC5
E
219 229Right-handed alpha
Helix 24
AC6
E
238 240Right-handed 310
Helix 25
AC7
E
241 247Right-handed alpha
Helix 26
AC8
E
282 293Right-handed alpha
Helix 27
AC9
E
296 305Right-handed alpha
Helix 28
AD1
E
314 322Right-handed alpha
Helix 29
AD2
E
324 337Right-handed alpha
Helix 30
AD3
E
345 362Right-handed alpha
Helix 31
AD4
E
366 380Right-handed alpha
Helix 32
AD5
F
26 42Right-handed alpha
Helix 33
AD6
F
52 61Right-handed alpha
Helix 34
AD7
F
62 65Right-handed 310
Helix 35
AD8
F
76 83Right-handed alpha
Helix 36
AD9
F
92 97Right-handed alpha
Helix 37
AE1
F
100 107Right-handed alpha
Helix 38
AE2
F
140 151Right-handed alpha
Helix 39
AE3
F
163 172Right-handed alpha
Helix 40
AE4
F
173 175Right-handed 310
Helix 41
AE5
F
195 211Right-handed alpha
Helix 42
AE6
F
219 229Right-handed alpha
Helix 43
AE7
F
238 240Right-handed 310
Helix 44
AE8
F
241 247Right-handed alpha
Helix 45
AE9
F
282 293Right-handed alpha
Helix 46
AF1
F
296 305Right-handed alpha
Helix 47
AF2
F
314 322Right-handed alpha
Helix 48
AF3
F
324 337Right-handed alpha
Helix 49
AF4
F
345 362Right-handed alpha
Helix 50
AF5
F
366 380Right-handed alpha
Helix 51
AF6
G
26 42Right-handed alpha
Helix 52
AF7
G
52 61Right-handed alpha
Helix 53
AF8
G
62 65Right-handed 310
Helix 54
AF9
G
76 83Right-handed alpha
Helix 55
AG1
G
92 97Right-handed alpha
Helix 56
AG2
G
100 107Right-handed alpha
Helix 57
AG3
G
140 151Right-handed alpha
Helix 58
AG4
G
163 172Right-handed alpha
Helix 59
AG5
G
173 175Right-handed 310
Helix 60
AG6
G
195 211Right-handed alpha
Helix 61
AG7
G
219 229Right-handed alpha
Helix 62
AG8
G
238 240Right-handed 310
Helix 63
AG9
G
241 247Right-handed alpha
Helix 64
AH1
G
282 293Right-handed alpha
Helix 65
AH2
G
296 305Right-handed alpha
Helix 66
AH3
G
314 322Right-handed alpha
Helix 67
AH4
G
324 337Right-handed alpha
Helix 68
AH5
G
345 362Right-handed alpha
Helix 69
AH6
G
366 380Right-handed alpha
Helix 70
AH7
H
26 42Right-handed alpha
Helix 71
AH8
H
52 61Right-handed alpha
Helix 72
AH9
H
62 65Right-handed 310
Helix 73
AI1
H
76 83Right-handed alpha
Helix 74
AI2
H
92 97Right-handed alpha
Helix 75
AI3
H
100 107Right-handed alpha
Helix 76
AI4
H
140 151Right-handed alpha
Helix 77
AI5
H
163 172Right-handed alpha
Helix 78
AI6
H
173 175Right-handed 310
Helix 79
AI7
H
195 211Right-handed alpha
Helix 80
AI8
H
219 229Right-handed alpha
Helix 81
AI9
H
238 240Right-handed 310
Helix 82
AJ1
H
241 247Right-handed alpha
Helix 83
AJ2
H
282 293Right-handed alpha
Helix 84
AJ3
H
296 305Right-handed alpha
Helix 85
AJ4
H
314 322Right-handed alpha
Helix 86
AJ5
H
324 337Right-handed alpha
Helix 87
AJ6
H
345 362Right-handed alpha
Helix 88
AJ7
H
366 380Right-handed alpha
Helix 89
AJ8
J
88 92Right-handed 310
Helix 90
AJ9
L
88 92Right-handed 310
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There are 54 sheets in PDB entry 4WJV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
146 151first strand
Strand 2
A
158 163anti-parallel
Strand 3
A
168 172anti-parallel
Strand 4
A
177 182anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
189 194first strand
Strand 2
A
201 205anti-parallel
Strand 3
A
210 214anti-parallel
Strand 4
A
219 220anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
232 237first strand
Strand 2
A
251 255anti-parallel
Strand 3
A
259 264anti-parallel
Strand 4
A
269 275anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
281 286first strand
Strand 2
A
291 296anti-parallel
Strand 3
A
301 305anti-parallel
Strand 4
A
311 316anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
323 328first strand
Strand 2
A
374 378anti-parallel
Strand 3
A
383 387anti-parallel
Strand 4
A
391 398anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
405 410first strand
Strand 2
A
416 421anti-parallel
Strand 3
A
426 430anti-parallel
Strand 4
A
436 440anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
447 452first strand
Strand 2
A
458 463anti-parallel
Strand 3
A
468 472anti-parallel
Strand 4
A
477 481anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
489 494first strand
Strand 2
A
500 505anti-parallel
Strand 3
A
511 514anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
146 151first strand
Strand 2
B
158 163anti-parallel
Strand 3
B
168 172anti-parallel
Strand 4
B
177 182anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
189 194first strand
Strand 2
B
201 205anti-parallel
Strand 3
B
210 213anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
232 237first strand
Strand 2
B
251 255anti-parallel
Strand 3
B
260 264anti-parallel
Strand 4
B
269 274anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
281 286first strand
Strand 2
B
291 296anti-parallel
Strand 3
B
301 305anti-parallel
Strand 4
B
311 316anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
323 328first strand
Strand 2
B
374 378anti-parallel
Strand 3
B
383 387anti-parallel
Strand 4
B
391 398anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
405 410first strand
Strand 2
B
416 421anti-parallel
Strand 3
B
426 430anti-parallel
Strand 4
B
436 440anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
447 452first strand
Strand 2
B
458 463anti-parallel
Strand 3
B
468 472anti-parallel
Strand 4
B
477 481anti-parallel
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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
489 494first strand
Strand 2
B
500 505anti-parallel
Strand 3
B
511 514anti-parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
146 151first strand
Strand 2
C
158 163anti-parallel
Strand 3
C
168 172anti-parallel
Strand 4
C
177 182anti-parallel
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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
189 194first strand
Strand 2
C
201 205anti-parallel
Strand 3
C
210 213anti-parallel
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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
232 237first strand
Strand 2
C
251 255anti-parallel
Strand 3
C
259 264anti-parallel
Strand 4
C
269 275anti-parallel
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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
281 286first strand
Strand 2
C
291 296anti-parallel
Strand 3
C
301 305anti-parallel
Strand 4
C
311 316anti-parallel
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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
323 328first strand
Strand 2
C
374 378anti-parallel
Strand 3
C
383 386anti-parallel
Strand 4
C
396 398anti-parallel
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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
405 410first strand
Strand 2
C
416 421anti-parallel
Strand 3
C
426 430anti-parallel
Strand 4
C
436 440anti-parallel
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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
447 452first strand
Strand 2
C
458 463anti-parallel
Strand 3
C
468 472anti-parallel
Strand 4
C
477 482anti-parallel
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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
489 494first strand
Strand 2
C
500 505anti-parallel
Strand 3
C
511 514anti-parallel
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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
146 151first strand
Strand 2
D
158 163anti-parallel
Strand 3
D
168 172anti-parallel
Strand 4
D
177 182anti-parallel
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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
189 194first strand
Strand 2
D
201 205anti-parallel
Strand 3
D
210 213anti-parallel
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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
232 237first strand
Strand 2
D
251 255anti-parallel
Strand 3
D
259 264anti-parallel
Strand 4
D
269 275anti-parallel
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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
281 286first strand
Strand 2
D
291 296anti-parallel
Strand 3
D
301 305anti-parallel
Strand 4
D
311 316anti-parallel
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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
323 328first strand
Strand 2
D
374 378anti-parallel
Strand 3
D
383 386anti-parallel
Strand 4
D
396 398anti-parallel
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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
405 410first strand
Strand 2
D
416 421anti-parallel
Strand 3
D
426 430anti-parallel
Strand 4
D
436 440anti-parallel
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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
447 452first strand
Strand 2
D
458 463anti-parallel
Strand 3
D
468 472anti-parallel
Strand 4
D
477 482anti-parallel
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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
489 494first strand
Strand 2
D
500 505anti-parallel
Strand 3
D
511 514anti-parallel
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There are 6 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
45 48first strand
Strand 2
E
17 20parallel
Strand 3
E
69 73parallel
Strand 4
E
268 276anti-parallel
Strand 5
E
115 121anti-parallel
Strand 6
E
311 312anti-parallel
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There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
45 48first strand
Strand 2
E
17 20parallel
Strand 3
E
69 73parallel
Strand 4
E
268 276anti-parallel
Strand 5
E
338 339parallel
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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
108 109first strand
Strand 2
E
112 113anti-parallel
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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
155 157first strand
Strand 2
E
232 237parallel
Strand 3
E
124 128anti-parallel
Strand 4
E
252 255anti-parallel
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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
177 181first strand
Strand 2
E
186 192anti-parallel
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There are 6 strands in AE2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
45 48first strand
Strand 2
F
17 20parallel
Strand 3
F
69 73parallel
Strand 4
F
268 276anti-parallel
Strand 5
F
115 121anti-parallel
Strand 6
F
311 312anti-parallel
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There are 5 strands in AE3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
45 48first strand
Strand 2
F
17 20parallel
Strand 3
F
69 73parallel
Strand 4
F
268 276anti-parallel
Strand 5
F
338 339parallel
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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
108 109first strand
Strand 2
F
112 113anti-parallel
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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
155 157first strand
Strand 2
F
232 237parallel
Strand 3
F
124 128anti-parallel
Strand 4
F
252 255anti-parallel
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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
177 181first strand
Strand 2
F
186 192anti-parallel
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There are 6 strands in AE7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
45 48first strand
Strand 2
G
17 20parallel
Strand 3
G
69 73parallel
Strand 4
G
268 277anti-parallel
Strand 5
G
115 121anti-parallel
Strand 6
G
311 312anti-parallel
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There are 3 strands in AE8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
86 87first strand
Strand 2
G
268 277anti-parallel
Strand 3
G
338 339parallel
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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
108 109first strand
Strand 2
G
112 113anti-parallel
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There are 3 strands in AF1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
234 237first strand
Strand 2
G
124 128anti-parallel
Strand 3
G
252 255anti-parallel
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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
177 181first strand
Strand 2
G
186 192anti-parallel
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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
259 260first strand
Strand 2
G
263 264anti-parallel
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There are 6 strands in AF4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
45 48first strand
Strand 2
H
17 20parallel
Strand 3
H
69 73parallel
Strand 4
H
268 276anti-parallel
Strand 5
H
115 121anti-parallel
Strand 6
H
311 312anti-parallel
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There are 5 strands in AF5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
45 48first strand
Strand 2
H
17 20parallel
Strand 3
H
69 73parallel
Strand 4
H
268 276anti-parallel
Strand 5
H
338 339parallel
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There are 2 strands in AF6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
108 109first strand
Strand 2
H
112 113anti-parallel
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There are 3 strands in AF7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
234 237first strand
Strand 2
H
124 128anti-parallel
Strand 3
H
252 255anti-parallel
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There are 2 strands in AF8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
177 181first strand
Strand 2
H
186 192anti-parallel
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There are 2 strands in AF9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
259 260first strand
Strand 2
H
263 264anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il