Analysis of interatomic Contacts of Structural Units in PDB entry:
4WJW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WJW entry

There are 3 chains in PDB entry 4WJW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 4HIS 77
B
 GLY 31THR 743
P
 TYR 2ARG 15
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 4WJW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
56 75Right-handed alpha
Helix 2
AA2
B
32 41Right-handed alpha
Helix 3
AA3
B
52 67Right-handed alpha
Helix 4
AA4
B
106 119Right-handed alpha
Helix 5
AA5
B
172 192Right-handed alpha
Helix 6
AA6
B
193 197Right-handed 310
Helix 7
AA7
B
211 226Right-handed alpha
Helix 8
AA8
B
227 233Right-handed 310
Helix 9
AA9
B
248 259Right-handed alpha
Helix 10
AB1
B
260 263Right-handed 310
Helix 11
AB2
B
264 279Right-handed alpha
Helix 12
AB3
B
282 295Right-handed alpha
Helix 13
AB4
B
297 299Right-handed 310
Helix 14
AB5
B
300 313Right-handed alpha
Helix 15
AB6
B
314 318Right-handed 310
Helix 16
AB7
B
326 350Right-handed alpha
Helix 17
AB8
B
352 367Right-handed alpha
Helix 18
AB9
B
370 384Right-handed alpha
Helix 19
AC1
B
386 396Right-handed alpha
Helix 20
AC2
B
434 445Right-handed alpha
Helix 21
AC3
B
449 456Right-handed alpha
Helix 22
AC4
B
472 477Right-handed alpha
Helix 23
AC5
B
488 493Right-handed 310
Helix 24
AC6
B
499 505Right-handed alpha
Helix 25
AC7
B
508 514Right-handed alpha
Helix 26
AC8
B
521 553Right-handed alpha
Helix 27
AC9
B
584 600Right-handed alpha
Helix 28
AD1
B
612 626Right-handed alpha
Helix 29
AD2
B
628 643Right-handed alpha
Helix 30
AD3
B
645 658Right-handed alpha
Helix 31
AD4
B
670 688Right-handed alpha
Helix 32
AD5
B
693 708Right-handed alpha
Helix 33
AD6
B
708 719Right-handed alpha
Helix 34
AD7
B
723 741Right-handed alpha
Helix 35
AD8
P
3 14Right-handed alpha
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There are 3 sheets in PDB entry 4WJW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 10first strand
Strand 2
A
20 21anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
168 169first strand
Strand 2
B
155 161anti-parallel
Strand 3
B
143 149anti-parallel
Strand 4
B
131 138anti-parallel
Strand 5
B
77 84anti-parallel
Strand 6
B
91 99anti-parallel
Strand 7
B
202 203parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
168 169first strand
Strand 2
B
155 161anti-parallel
Strand 3
B
143 149anti-parallel
Strand 4
B
131 138anti-parallel
Strand 5
B
77 84anti-parallel
Strand 6
B
91 99anti-parallel
Strand 7
B
45 47anti-parallel
Strand 8
B
461 462anti-parallel
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