Analysis of interatomic Contacts of Structural Units in PDB entry:
4WK6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WK6 entry

There are 4 chains in PDB entry 4WK6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 4TYR 246
B
 GLN 3TYR 246
C
 GLN 3TYR 246
D
 GLN 3TYR 246
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 4WK6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 32Right-handed alpha
Helix 2
AA2
A
42 54Right-handed alpha
Helix 3
AA3
A
66 82Right-handed alpha
Helix 4
AA4
A
103 115Right-handed alpha
Helix 5
AA5
A
115 133Right-handed alpha
Helix 6
AA6
A
147 152Right-handed alpha
Helix 7
AA7
A
152 174Right-handed alpha
Helix 8
AA8
A
190 195Right-handed alpha
Helix 9
AA9
A
197 206Right-handed alpha
Helix 10
AB1
A
215 228Right-handed alpha
Helix 11
AB2
A
229 232Right-handed 310
Helix 12
AB3
B
19 32Right-handed alpha
Helix 13
AB4
B
42 54Right-handed alpha
Helix 14
AB5
B
66 82Right-handed alpha
Helix 15
AB6
B
103 115Right-handed alpha
Helix 16
AB7
B
115 133Right-handed alpha
Helix 17
AB8
B
154 174Right-handed alpha
Helix 18
AB9
B
190 195Right-handed alpha
Helix 19
AC1
B
197 206Right-handed alpha
Helix 20
AC2
B
215 228Right-handed alpha
Helix 21
AC3
B
229 232Right-handed 310
Helix 22
AC4
C
19 32Right-handed alpha
Helix 23
AC5
C
42 54Right-handed alpha
Helix 24
AC6
C
66 82Right-handed alpha
Helix 25
AC7
C
103 115Right-handed alpha
Helix 26
AC8
C
115 133Right-handed alpha
Helix 27
AC9
C
152 174Right-handed alpha
Helix 28
AD1
C
190 195Right-handed alpha
Helix 29
AD2
C
197 206Right-handed alpha
Helix 30
AD3
C
215 228Right-handed alpha
Helix 31
AD4
C
229 232Right-handed 310
Helix 32
AD5
D
19 32Right-handed alpha
Helix 33
AD6
D
42 54Right-handed alpha
Helix 34
AD7
D
66 82Right-handed alpha
Helix 35
AD8
D
103 115Right-handed alpha
Helix 36
AD9
D
115 133Right-handed alpha
Helix 37
AE1
D
153 174Right-handed alpha
Helix 38
AE2
D
190 195Right-handed alpha
Helix 39
AE3
D
197 206Right-handed alpha
Helix 40
AE4
D
215 228Right-handed alpha
Helix 41
AE5
D
229 232Right-handed 310
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There are 4 sheets in PDB entry 4WK6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 61first strand
Strand 2
A
35 40parallel
Strand 3
A
11 14parallel
Strand 4
A
86 91parallel
Strand 5
A
135 141parallel
Strand 6
A
178 185parallel
Strand 7
A
238 241parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 61first strand
Strand 2
B
35 40parallel
Strand 3
B
11 14parallel
Strand 4
B
86 89parallel
Strand 5
B
135 140parallel
Strand 6
B
178 185parallel
Strand 7
B
238 241parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
57 61first strand
Strand 2
C
35 40parallel
Strand 3
C
11 14parallel
Strand 4
C
86 89parallel
Strand 5
C
135 140parallel
Strand 6
C
178 185parallel
Strand 7
C
238 241parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
57 61first strand
Strand 2
D
35 40parallel
Strand 3
D
11 14parallel
Strand 4
D
86 89parallel
Strand 5
D
135 140parallel
Strand 6
D
178 185parallel
Strand 7
D
238 241parallel
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