Analysis of interatomic Contacts of Structural Units in PDB entry:
4WLQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WLQ entry

There are 2 chains in PDB entry 4WLQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 6LYS 314
B
 VAL 286ASN 384
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 21 helices in PDB entry 4WLQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 25Right-handed alpha
Helix 2
AA2
A
72 77Right-handed alpha
Helix 3
AA3
A
84 86Right-handed 310
Helix 4
AA4
A
87 98Right-handed alpha
Helix 5
AA5
A
107 118Right-handed alpha
Helix 6
AA6
A
122 132Right-handed alpha
Helix 7
AA7
A
133 143Right-handed alpha
Helix 8
AA8
A
196 214Right-handed alpha
Helix 9
AA9
A
226 243Right-handed alpha
Helix 10
AB1
A
255 289Right-handed alpha
Helix 11
AB2
A
291 306Right-handed alpha
Helix 12
AB3
A
308 313Right-handed alpha
Helix 13
AB4
B
287 293Right-handed alpha
Helix 14
AB5
B
297 302Right-handed alpha
Helix 15
AB6
B
303 311Right-handed alpha
Helix 16
AB7
B
312 314Right-handed 310
Helix 17
AB8
B
325 333Right-handed alpha
Helix 18
AB9
B
333 348Right-handed alpha
Helix 19
AC1
B
353 358Right-handed alpha
Helix 20
AC2
B
362 371Right-handed alpha
Helix 21
AC3
B
373 379Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 4WLQ.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 34first strand
Strand 2
A
218 225anti-parallel
Strand 3
A
49 56anti-parallel
Strand 4
A
164 171anti-parallel
Strand 5
A
174 178anti-parallel
Strand 6
A
186 190anti-parallel
Strand 7
A
67 68anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il