Analysis of interatomic Contacts of Structural Units in PDB entry:
4WLR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WLR entry

There are 3 chains in PDB entry 4WLR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 6LYS 318
B
 VAL 286ASN 384
C
 MET 1GLY 76
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 4WLR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 25Right-handed alpha
Helix 2
AA2
A
40 45Right-handed alpha
Helix 3
AA3
A
71 76Right-handed 310
Helix 4
AA4
A
87 98Right-handed alpha
Helix 5
AA5
A
107 119Right-handed alpha
Helix 6
AA6
A
122 132Right-handed alpha
Helix 7
AA7
A
133 143Right-handed alpha
Helix 8
AA8
A
196 210Right-handed alpha
Helix 9
AA9
A
226 245Right-handed alpha
Helix 10
AB1
A
255 289Right-handed alpha
Helix 11
AB2
A
291 305Right-handed alpha
Helix 12
AB3
A
307 318Right-handed alpha
Helix 13
AB4
B
287 292Right-handed alpha
Helix 14
AB5
B
293 298Right-handed alpha
Helix 15
AB6
B
299 302Right-handed 310
Helix 16
AB7
B
303 311Right-handed alpha
Helix 17
AB8
B
312 314Right-handed 310
Helix 18
AB9
B
323 325Right-handed 310
Helix 19
AC1
B
326 333Right-handed alpha
Helix 20
AC2
B
333 349Right-handed alpha
Helix 21
AC3
B
352 359Right-handed alpha
Helix 22
AC4
B
362 372Right-handed alpha
Helix 23
AC5
B
373 384Right-handed alpha
Helix 24
AC6
C
22 35Right-handed alpha
Helix 25
AC7
C
37 39Right-handed 310
Helix 26
AC8
C
56 60Right-handed 310
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There are 3 sheets in PDB entry 4WLR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 12first strand
Strand 2
C
74 75anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 34first strand
Strand 2
A
219 225anti-parallel
Strand 3
A
49 57anti-parallel
Strand 4
A
163 171anti-parallel
Strand 5
A
174 178anti-parallel
Strand 6
A
186 190anti-parallel
Strand 7
A
67 68anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
12 16first strand
Strand 2
C
2 7anti-parallel
Strand 3
C
66 71parallel
Strand 4
C
41 45anti-parallel
Strand 5
C
48 49anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il