Analysis of interatomic Contacts of Structural Units in PDB entry:
4WN9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4WN9 entry

There are 4 chains in PDB entry 4WN9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 4	LYS 520
B	MET 1	ARG 458
C	ASN 4	LYS 520
D	MET 1	ARG 458

There are 99 helices in PDB entry 4WN9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	4	11	Right-handed alpha
Helix 2	AA2	A	14	23	Right-handed alpha
Helix 3	AA3	A	53	59	Right-handed alpha
Helix 4	AA4	A	76	82	Right-handed alpha
Helix 5	AA5	A	93	97	Right-handed 310
Helix 6	AA6	A	111	118	Right-handed alpha
Helix 7	AA7	A	119	135	Right-handed alpha
Helix 8	AA8	A	146	151	Right-handed alpha
Helix 9	AA9	A	153	166	Right-handed alpha
Helix 10	AB1	A	181	197	Right-handed alpha
Helix 11	AB2	A	217	219	Right-handed 310
Helix 12	AB3	A	220	233	Right-handed alpha
Helix 13	AB4	A	245	251	Right-handed alpha
Helix 14	AB5	A	262	278	Right-handed alpha
Helix 15	AB6	A	288	304	Right-handed alpha
Helix 16	AB7	A	305	322	Right-handed alpha
Helix 17	AB8	A	323	335	Right-handed alpha
Helix 18	AB9	A	346	351	Right-handed alpha
Helix 19	AC1	A	351	358	Right-handed alpha
Helix 20	AC2	A	371	377	Right-handed alpha
Helix 21	AC3	A	378	384	Right-handed 310
Helix 22	AC4	A	410	421	Right-handed alpha
Helix 23	AC5	A	429	434	Right-handed alpha
Helix 24	AC6	A	445	457	Right-handed alpha
Helix 25	AC7	A	464	474	Right-handed alpha
Helix 26	AC8	A	483	487	Right-handed 310
Helix 27	AC9	A	491	508	Right-handed alpha
Helix 28	AD1	A	509	515	Right-handed 310
Helix 29	AD2	B	23	33	Right-handed alpha
Helix 30	AD3	B	45	61	Right-handed alpha
Helix 31	AD4	B	74	79	Right-handed alpha
Helix 32	AD5	B	80	95	Right-handed alpha
Helix 33	AD6	B	105	112	Right-handed alpha
Helix 34	AD7	B	114	125	Right-handed alpha
Helix 35	AD8	B	145	162	Right-handed alpha
Helix 36	AD9	B	180	195	Right-handed alpha
Helix 37	AE1	B	225	231	Right-handed alpha
Helix 38	AE2	B	232	235	Right-handed 310
Helix 39	AE3	B	242	258	Right-handed alpha
Helix 40	AE4	B	269	285	Right-handed alpha
Helix 41	AE5	B	289	306	Right-handed alpha
Helix 42	AE6	B	307	310	Right-handed 310
Helix 43	AE7	B	320	334	Right-handed alpha
Helix 44	AE8	B	347	361	Right-handed alpha
Helix 45	AE9	B	373	384	Right-handed alpha
Helix 46	AF1	B	392	394	Right-handed 310
Helix 47	AF2	B	395	403	Right-handed alpha
Helix 48	AF3	B	418	422	Right-handed 310
Helix 49	AF4	B	425	449	Right-handed alpha
Helix 50	AF5	B	450	454	Right-handed 310
Helix 51	AF6	C	5	11	Right-handed alpha
Helix 52	AF7	C	14	23	Right-handed alpha
Helix 53	AF8	C	53	59	Right-handed alpha
Helix 54	AF9	C	76	82	Right-handed alpha
Helix 55	AG1	C	93	97	Right-handed 310
Helix 56	AG2	C	111	118	Right-handed alpha
Helix 57	AG3	C	119	135	Right-handed alpha
Helix 58	AG4	C	144	151	Right-handed alpha
Helix 59	AG5	C	153	166	Right-handed alpha
Helix 60	AG6	C	181	197	Right-handed alpha
Helix 61	AG7	C	217	219	Right-handed 310
Helix 62	AG8	C	220	233	Right-handed alpha
Helix 63	AG9	C	245	251	Right-handed alpha
Helix 64	AH1	C	262	278	Right-handed alpha
Helix 65	AH2	C	288	304	Right-handed alpha
Helix 66	AH3	C	305	335	Right-handed alpha
Helix 67	AH4	C	346	351	Right-handed alpha
Helix 68	AH5	C	351	358	Right-handed alpha
Helix 69	AH6	C	371	377	Right-handed alpha
Helix 70	AH7	C	378	384	Right-handed 310
Helix 71	AH8	C	410	420	Right-handed alpha
Helix 72	AH9	C	429	434	Right-handed alpha
Helix 73	AI1	C	445	457	Right-handed alpha
Helix 74	AI2	C	464	474	Right-handed alpha
Helix 75	AI3	C	483	487	Right-handed 310
Helix 76	AI4	C	491	509	Right-handed alpha
Helix 77	AI5	C	510	515	Right-handed 310
Helix 78	AI6	D	23	33	Right-handed alpha
Helix 79	AI7	D	45	61	Right-handed alpha
Helix 80	AI8	D	72	79	Right-handed alpha
Helix 81	AI9	D	80	95	Right-handed alpha
Helix 82	AJ1	D	105	112	Right-handed alpha
Helix 83	AJ2	D	114	125	Right-handed alpha
Helix 84	AJ3	D	145	162	Right-handed alpha
Helix 85	AJ4	D	180	194	Right-handed alpha
Helix 86	AJ5	D	225	232	Right-handed alpha
Helix 87	AJ6	D	233	235	Right-handed 310
Helix 88	AJ7	D	242	258	Right-handed alpha
Helix 89	AJ8	D	269	285	Right-handed alpha
Helix 90	AJ9	D	289	306	Right-handed alpha
Helix 91	AK1	D	307	310	Right-handed 310
Helix 92	AK2	D	320	334	Right-handed alpha
Helix 93	AK3	D	347	362	Right-handed alpha
Helix 94	AK4	D	373	384	Right-handed alpha
Helix 95	AK5	D	392	394	Right-handed 310
Helix 96	AK6	D	395	403	Right-handed alpha
Helix 97	AK7	D	418	422	Right-handed 310
Helix 98	AK8	D	425	449	Right-handed alpha
Helix 99	AK9	D	450	454	Right-handed 310

There are 12 sheets in PDB entry 4WN9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	25	27	first strand
Strand 2	A	439	441	anti-parallel
Strand 3	A	361	367	parallel
Strand 4	A	338	343	parallel
Strand 5	A	460	462	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	169	172	first strand
Strand 2	A	138	143	parallel
Strand 3	A	69	74	parallel
Strand 4	A	106	107	parallel
Strand 5	B	16	17	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	235	241	first strand
Strand 2	A	209	215	parallel
Strand 3	A	257	260	parallel
Strand 4	A	281	283	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	67	68	first strand
Strand 2	B	38	43	parallel
Strand 3	B	99	104	parallel
Strand 4	B	133	136	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	198	200	first strand
Strand 2	B	172	175	parallel
Strand 3	B	237	241	parallel
Strand 4	B	261	264	parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	367	370	first strand
Strand 2	B	337	343	parallel
Strand 3	B	314	318	parallel
Strand 4	B	388	391	parallel
Strand 5	B	406	408	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	25	27	first strand
Strand 2	C	439	441	anti-parallel
Strand 3	C	361	367	parallel
Strand 4	C	338	343	parallel
Strand 5	C	460	462	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	169	172	first strand
Strand 2	C	138	143	parallel
Strand 3	C	69	74	parallel
Strand 4	C	106	107	parallel
Strand 5	D	16	17	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	235	241	first strand
Strand 2	C	209	215	parallel
Strand 3	C	257	260	parallel
Strand 4	C	281	283	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	67	68	first strand
Strand 2	D	38	43	parallel
Strand 3	D	99	104	parallel
Strand 4	D	133	136	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	198	200	first strand
Strand 2	D	172	175	parallel
Strand 3	D	237	241	parallel
Strand 4	D	261	264	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	367	370	first strand
Strand 2	D	337	343	parallel
Strand 3	D	314	318	parallel
Strand 4	D	388	391	parallel
Strand 5	D	406	408	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4WN9

Analysis of interatomic Contacts of Structural Units in PDB entry:
4WN9