Analysis of interatomic Contacts of Structural Units in PDB entry:
4WNH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WNH entry

There are 2 chains in PDB entry 4WNH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 94GLU 391
D
 GLN 50LEU 84
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 4WNH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
110 128Right-handed alpha
Helix 2
AA2
A
143 158Right-handed alpha
Helix 3
AA3
A
173 192Right-handed alpha
Helix 4
AA4
A
198 203Right-handed alpha
Helix 5
AA5
A
204 208Right-handed 310
Helix 6
AA6
A
209 214Right-handed alpha
Helix 7
AA7
A
233 244Right-handed 310
Helix 8
AA8
A
258 264Right-handed alpha
Helix 9
AA9
A
264 271Right-handed alpha
Helix 10
AB1
A
296 302Right-handed alpha
Helix 11
AB2
A
302 309Right-handed alpha
Helix 12
AB3
A
310 321Right-handed alpha
Helix 13
AB4
A
328 340Right-handed alpha
Helix 14
AB5
A
348 352Right-handed 310
Helix 15
AB6
A
357 363Right-handed 310
Helix 16
AB7
A
364 373Right-handed alpha
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There are 2 sheets in PDB entry 4WNH. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 172first strand
Strand 2
A
134 142parallel
Strand 3
A
96 103parallel
Strand 4
A
220 224parallel
Strand 5
A
287 295anti-parallel
Strand 6
A
250 254anti-parallel
Strand 7
A
344 347parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
228 230first strand
Strand 2
A
380 382anti-parallel
Strand 3
A
353 354parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il