Analysis of interatomic Contacts of Structural Units in PDB entry:
4WNQ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4WNQ entry

There are 4 chains in PDB entry 4WNQ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 2	SER 214
B	VAL 3	ASP 253
C	GLN 2	SER 214
D	ALA 2	ASP 253

There are 12 helices in PDB entry 4WNQ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	95	99	Right-handed 310
Helix 2	AA2	A	196	201	Right-handed alpha
Helix 3	AA3	B	95	99	Right-handed 310
Helix 4	AA4	B	125	129	Right-handed 310
Helix 5	AA5	B	140	148	Right-handed alpha
Helix 6	AA6	B	207	211	Right-handed alpha
Helix 7	AA7	C	95	99	Right-handed 310
Helix 8	AA8	C	196	201	Right-handed alpha
Helix 9	AA9	D	95	99	Right-handed 310
Helix 10	AB1	D	125	129	Right-handed 310
Helix 11	AB2	D	140	148	Right-handed alpha
Helix 12	AB3	D	207	211	Right-handed alpha

There are 22 sheets in PDB entry 4WNQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3	5	first strand
Strand 2	A	24	26	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	10	14	first strand
Strand 2	A	118	123	parallel
Strand 3	A	100	108	anti-parallel
Strand 4	A	33	44	anti-parallel
Strand 5	A	50	57	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	10	14	first strand
Strand 2	A	118	123	parallel
Strand 3	A	100	108	anti-parallel
Strand 4	A	111	114	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	19	21	first strand
Strand 2	A	86	91	anti-parallel
Strand 3	A	76	81	anti-parallel
Strand 4	A	71	72	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	132	135	first strand
Strand 2	A	145	150	anti-parallel
Strand 3	A	185	190	anti-parallel
Strand 4	A	166	168	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	173	174	first strand
Strand 2	B	179	181	anti-parallel
Strand 3	B	197	206	anti-parallel
Strand 4	B	149	159	anti-parallel
Strand 5	B	133	137	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	173	174	first strand
Strand 2	B	179	181	anti-parallel
Strand 3	B	197	206	anti-parallel
Strand 4	B	186	187	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	4	7	first strand
Strand 2	B	19	25	anti-parallel
Strand 3	B	86	91	anti-parallel
Strand 4	B	76	83	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	10	14	first strand
Strand 2	B	118	123	parallel
Strand 3	B	100	107	anti-parallel
Strand 4	B	32	44	anti-parallel
Strand 5	B	50	57	anti-parallel
Strand 6	B	66	67	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	10	14	first strand
Strand 2	B	118	123	parallel
Strand 3	B	100	107	anti-parallel
Strand 4	B	112	114	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	173	175	first strand
Strand 2	B	164	170	anti-parallel
Strand 3	B	216	223	anti-parallel
Strand 4	B	242	249	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	3	5	first strand
Strand 2	C	24	26	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	10	14	first strand
Strand 2	C	118	123	parallel
Strand 3	C	100	108	anti-parallel
Strand 4	C	33	44	anti-parallel
Strand 5	C	50	57	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	10	14	first strand
Strand 2	C	118	123	parallel
Strand 3	C	100	108	anti-parallel
Strand 4	C	111	114	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	19	21	first strand
Strand 2	C	86	91	anti-parallel
Strand 3	C	76	81	anti-parallel
Strand 4	C	71	72	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	132	135	first strand
Strand 2	C	145	150	anti-parallel
Strand 3	C	185	190	anti-parallel
Strand 4	C	166	168	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	173	174	first strand
Strand 2	D	179	181	anti-parallel
Strand 3	D	197	206	anti-parallel
Strand 4	D	149	159	anti-parallel
Strand 5	D	133	137	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	173	174	first strand
Strand 2	D	179	181	anti-parallel
Strand 3	D	197	206	anti-parallel
Strand 4	D	186	187	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	3	7	first strand
Strand 2	D	19	26	anti-parallel
Strand 3	D	86	91	anti-parallel
Strand 4	D	76	83	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	10	14	first strand
Strand 2	D	118	123	parallel
Strand 3	D	100	106	anti-parallel
Strand 4	D	32	44	anti-parallel
Strand 5	D	50	57	anti-parallel
Strand 6	D	60	67	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	10	14	first strand
Strand 2	D	118	123	parallel
Strand 3	D	100	106	anti-parallel
Strand 4	D	113	114	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	173	175	first strand
Strand 2	D	164	170	anti-parallel
Strand 3	D	216	223	anti-parallel
Strand 4	D	242	249	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4WNQ

Analysis of interatomic Contacts of Structural Units in PDB entry:
4WNQ