Analysis of interatomic Contacts of Structural Units in PDB entry:
4WNR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WNR entry

There is 1 chain in PDB entry 4WNR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 307LEU 629
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 4WNR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
333 343Right-handed alpha
Helix 2
AA2
A
378 384Right-handed alpha
Helix 3
AA3
A
385 391Right-handed 310
Helix 4
AA4
A
408 421Right-handed alpha
Helix 5
AA5
A
441 449Right-handed alpha
Helix 6
AA6
A
465 479Right-handed alpha
Helix 7
AA7
A
480 484Right-handed 310
Helix 8
AA8
A
489 501Right-handed alpha
Helix 9
AA9
A
507 518Right-handed alpha
Helix 10
AB1
A
522 536Right-handed alpha
Helix 11
AB2
A
554 567Right-handed alpha
Helix 12
AB3
A
568 573Right-handed alpha
Helix 13
AB4
A
582 587Right-handed alpha
Helix 14
AB5
A
598 600Right-handed 310
Helix 15
AB6
A
601 612Right-handed alpha
Helix 16
AB7
A
626 629Right-handed 310
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There are 4 sheets in PDB entry 4WNR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
316 318first strand
Strand 2
A
486 488anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
357 365first strand
Strand 2
A
368 376anti-parallel
Strand 3
A
321 327parallel
Strand 4
A
396 401parallel
Strand 5
A
425 429parallel
Strand 6
A
452 457parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
505 506first strand
Strand 2
A
551 552anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
577 579first strand
Strand 2
A
622 624anti-parallel
Strand 3
A
616 617anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il