Analysis of interatomic Contacts of Structural Units in PDB entry:
4WOE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WOE entry

There are 2 chains in PDB entry 4WOE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 716
B
 MET 1LEU 716
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 66 helices in PDB entry 4WOE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 16Right-handed alpha
Helix 2
AA2
A
21 27Right-handed alpha
Helix 3
AA3
A
28 36Right-handed alpha
Helix 4
AA4
A
45 56Right-handed alpha
Helix 5
AA5
A
68 73Right-handed alpha
Helix 6
AA6
A
73 85Right-handed alpha
Helix 7
AA7
A
87 91Right-handed 310
Helix 8
AA8
A
101 105Right-handed 310
Helix 9
AA9
A
109 113Right-handed 310
Helix 10
AB1
A
138 155Right-handed alpha
Helix 11
AB2
A
157 160Right-handed 310
Helix 12
AB3
A
171 181Right-handed alpha
Helix 13
AB4
A
189 195Right-handed alpha
Helix 14
AB5
A
235 251Right-handed alpha
Helix 15
AB6
A
268 272Right-handed 310
Helix 16
AB7
A
284 290Right-handed alpha
Helix 17
AB8
A
292 300Right-handed alpha
Helix 18
AB9
A
330 356Right-handed alpha
Helix 19
AC1
A
368 376Right-handed alpha
Helix 20
AC2
A
377 379Right-handed 310
Helix 21
AC3
A
384 389Right-handed alpha
Helix 22
AC4
A
391 399Right-handed alpha
Helix 23
AC5
A
408 419Right-handed alpha
Helix 24
AC6
A
431 436Right-handed alpha
Helix 25
AC7
A
436 449Right-handed alpha
Helix 26
AC8
A
501 518Right-handed alpha
Helix 27
AC9
A
519 523Right-handed 310
Helix 28
AD1
A
531 533Right-handed 310
Helix 29
AD2
A
534 544Right-handed alpha
Helix 30
AD3
A
552 558Right-handed alpha
Helix 31
AD4
A
598 615Right-handed alpha
Helix 32
AD5
A
631 635Right-handed 310
Helix 33
AD6
A
649 652Right-handed 310
Helix 34
AD7
A
653 663Right-handed alpha
Helix 35
AD8
A
678 680Right-handed 310
Helix 36
AD9
A
694 712Right-handed alpha
Helix 37
AE1
B
5 16Right-handed alpha
Helix 38
AE2
B
21 27Right-handed alpha
Helix 39
AE3
B
28 36Right-handed alpha
Helix 40
AE4
B
45 56Right-handed alpha
Helix 41
AE5
B
68 73Right-handed alpha
Helix 42
AE6
B
73 85Right-handed alpha
Helix 43
AE7
B
109 113Right-handed 310
Helix 44
AE8
B
138 155Right-handed alpha
Helix 45
AE9
B
157 160Right-handed 310
Helix 46
AF1
B
171 181Right-handed alpha
Helix 47
AF2
B
189 194Right-handed alpha
Helix 48
AF3
B
235 251Right-handed alpha
Helix 49
AF4
B
268 272Right-handed 310
Helix 50
AF5
B
284 290Right-handed alpha
Helix 51
AF6
B
292 300Right-handed alpha
Helix 52
AF7
B
330 356Right-handed alpha
Helix 53
AF8
B
368 377Right-handed alpha
Helix 54
AF9
B
384 389Right-handed alpha
Helix 55
AG1
B
391 399Right-handed alpha
Helix 56
AG2
B
408 419Right-handed alpha
Helix 57
AG3
B
431 436Right-handed alpha
Helix 58
AG4
B
436 449Right-handed alpha
Helix 59
AG5
B
501 518Right-handed alpha
Helix 60
AG6
B
520 523Right-handed 310
Helix 61
AG7
B
534 544Right-handed alpha
Helix 62
AG8
B
552 558Right-handed alpha
Helix 63
AG9
B
598 615Right-handed alpha
Helix 64
AH1
B
631 635Right-handed 310
Helix 65
AH2
B
657 664Right-handed alpha
Helix 66
AH3
B
694 716Right-handed alpha
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There are 8 sheets in PDB entry 4WOE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 166first strand
Strand 2
A
206 210anti-parallel
Strand 3
A
215 219anti-parallel
Strand 4
A
225 232anti-parallel
Strand 5
A
117 126anti-parallel
Strand 6
A
277 283anti-parallel
Strand 7
A
318 323anti-parallel
Strand 8
A
302 305anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
258 259first strand
Strand 2
A
263 264anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
525 529first strand
Strand 2
A
569 573anti-parallel
Strand 3
A
578 582anti-parallel
Strand 4
A
588 595anti-parallel
Strand 5
A
480 489anti-parallel
Strand 6
A
639 646anti-parallel
Strand 7
A
682 687anti-parallel
Strand 8
A
666 669anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
621 622first strand
Strand 2
A
626 627anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
162 166first strand
Strand 2
B
206 210anti-parallel
Strand 3
B
215 219anti-parallel
Strand 4
B
225 232anti-parallel
Strand 5
B
117 126anti-parallel
Strand 6
B
277 283anti-parallel
Strand 7
B
318 323anti-parallel
Strand 8
B
302 305anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
258 259first strand
Strand 2
B
263 264anti-parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
525 529first strand
Strand 2
B
569 573anti-parallel
Strand 3
B
578 582anti-parallel
Strand 4
B
588 595anti-parallel
Strand 5
B
480 489anti-parallel
Strand 6
B
639 646anti-parallel
Strand 7
B
682 687anti-parallel
Strand 8
B
666 669anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
621 622first strand
Strand 2
B
626 627anti-parallel
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