Analysis of interatomic Contacts of Structural Units in PDB entry:
4WOJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WOJ entry

There are 2 chains in PDB entry 4WOJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ILE 364
B
 HIS 0ILE 364
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 4WOJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 25Right-handed alpha
Helix 2
AA2
A
46 52Right-handed 310
Helix 3
AA3
A
59 66Right-handed alpha
Helix 4
AA4
A
74 88Right-handed alpha
Helix 5
AA5
A
111 125Right-handed alpha
Helix 6
AA6
A
134 144Right-handed alpha
Helix 7
AA7
A
144 149Right-handed alpha
Helix 8
AA8
A
163 167Right-handed 310
Helix 9
AA9
A
168 186Right-handed alpha
Helix 10
AB1
A
191 204Right-handed alpha
Helix 11
AB2
A
235 250Right-handed alpha
Helix 12
AB3
A
283 293Right-handed alpha
Helix 13
AB4
A
304 312Right-handed alpha
Helix 14
AB5
A
313 318Right-handed alpha
Helix 15
AB6
A
351 364Right-handed alpha
Helix 16
AB7
B
11 25Right-handed alpha
Helix 17
AB8
B
46 52Right-handed 310
Helix 18
AB9
B
59 65Right-handed alpha
Helix 19
AC1
B
74 88Right-handed alpha
Helix 20
AC2
B
111 125Right-handed alpha
Helix 21
AC3
B
134 144Right-handed alpha
Helix 22
AC4
B
144 149Right-handed alpha
Helix 23
AC5
B
163 167Right-handed 310
Helix 24
AC6
B
168 186Right-handed alpha
Helix 25
AC7
B
191 204Right-handed alpha
Helix 26
AC8
B
235 250Right-handed alpha
Helix 27
AC9
B
283 293Right-handed alpha
Helix 28
AD1
B
304 312Right-handed alpha
Helix 29
AD2
B
313 318Right-handed alpha
Helix 30
AD3
B
351 364Right-handed alpha
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There are 4 sheets in PDB entry 4WOJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 56first strand
Strand 2
A
30 36parallel
Strand 3
A
2 7parallel
Strand 4
A
68 71parallel
Strand 5
A
93 96parallel
Strand 6
A
129 132parallel
Strand 7
A
107 110parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
257 260first strand
Strand 2
A
153 161parallel
Strand 3
A
269 278anti-parallel
Strand 4
A
337 345anti-parallel
Strand 5
A
323 330anti-parallel
Strand 6
A
298 301parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
55 56first strand
Strand 2
B
30 36parallel
Strand 3
B
2 7parallel
Strand 4
B
68 71parallel
Strand 5
B
93 96parallel
Strand 6
B
129 132parallel
Strand 7
B
107 110parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
257 260first strand
Strand 2
B
153 161parallel
Strand 3
B
269 278anti-parallel
Strand 4
B
337 345anti-parallel
Strand 5
B
323 330anti-parallel
Strand 6
B
298 301parallel
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