Analysis of interatomic Contacts of Structural Units in PDB entry:
4WOY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WOY entry

There are 2 chains in PDB entry 4WOY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 126PHE 454
B
 THR 126PHE 454
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 4WOY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
126 139Right-handed alpha
Helix 2
AA2
A
142 168Right-handed alpha
Helix 3
AA3
A
213 215Right-handed 310
Helix 4
AA4
A
238 242Right-handed 310
Helix 5
AA5
A
250 265Right-handed alpha
Helix 6
AA6
A
267 276Right-handed alpha
Helix 7
AA7
A
334 350Right-handed alpha
Helix 8
AA8
A
352 367Right-handed alpha
Helix 9
AA9
A
374 387Right-handed alpha
Helix 10
AB1
A
393 395Right-handed 310
Helix 11
AB2
A
396 414Right-handed alpha
Helix 12
AB3
A
432 443Right-handed alpha
Helix 13
AB4
A
444 446Right-handed 310
Helix 14
AB5
A
449 453Right-handed 310
Helix 15
AB6
B
127 139Right-handed alpha
Helix 16
AB7
B
142 168Right-handed alpha
Helix 17
AB8
B
213 215Right-handed 310
Helix 18
AB9
B
238 242Right-handed 310
Helix 19
AC1
B
250 265Right-handed alpha
Helix 20
AC2
B
267 275Right-handed alpha
Helix 21
AC3
B
334 350Right-handed alpha
Helix 22
AC4
B
352 367Right-handed alpha
Helix 23
AC5
B
374 387Right-handed alpha
Helix 24
AC6
B
396 414Right-handed alpha
Helix 25
AC7
B
432 449Right-handed alpha
Helix 26
AC8
B
450 453Right-handed 310
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There are 8 sheets in PDB entry 4WOY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
177 179first strand
Strand 2
A
194 199anti-parallel
Strand 3
A
298 307parallel
Strand 4
A
316 318anti-parallel
Strand 5
A
330 333anti-parallel
Strand 6
A
222 227anti-parallel
Strand 7
A
207 211anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
177 179first strand
Strand 2
A
194 199anti-parallel
Strand 3
A
298 307parallel
Strand 4
A
287 291anti-parallel
Strand 5
A
278 281anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
244 245first strand
Strand 2
A
248 249anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
418 419first strand
Strand 2
A
422 426anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
177 179first strand
Strand 2
B
194 199anti-parallel
Strand 3
B
298 308parallel
Strand 4
B
316 318anti-parallel
Strand 5
B
330 333anti-parallel
Strand 6
B
222 227anti-parallel
Strand 7
B
207 211anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
177 179first strand
Strand 2
B
194 199anti-parallel
Strand 3
B
298 308parallel
Strand 4
B
289 293anti-parallel
Strand 5
B
278 281anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
244 245first strand
Strand 2
B
248 249anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
418 419first strand
Strand 2
B
422 426anti-parallel
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