Analysis of interatomic Contacts of Structural Units in PDB entry:
4WOZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4WOZ entry

There are 8 chains in PDB entry 4WOZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 13	PHE 302
B	THR 13	PHE 302
C	ASP 14	PHE 302
D	THR 13	PHE 302
E	THR 13	PHE 302
F	THR 13	PHE 302
G	THR 13	PHE 302
H	THR 13	PHE 302

There are110 helices in PDB entry 4WOZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	33	47	Right-handed alpha
Helix 2	AA2	A	57	65	Right-handed 310
Helix 3	AA3	A	66	82	Right-handed alpha
Helix 4	AA4	A	95	110	Right-handed alpha
Helix 5	AA5	A	125	139	Right-handed alpha
Helix 6	AA6	A	149	154	Right-handed alpha
Helix 7	AA7	A	158	166	Right-handed alpha
Helix 8	AA8	A	180	191	Right-handed alpha
Helix 9	AA9	A	200	202	Right-handed 310
Helix 10	AB1	A	203	210	Right-handed alpha
Helix 11	AB2	A	219	236	Right-handed alpha
Helix 12	AB3	A	238	260	Right-handed alpha
Helix 13	AB4	A	260	272	Right-handed alpha
Helix 14	AB5	A	287	302	Right-handed alpha
Helix 15	AB6	B	33	47	Right-handed alpha
Helix 16	AB7	B	57	65	Right-handed 310
Helix 17	AB8	B	66	82	Right-handed alpha
Helix 18	AB9	B	95	110	Right-handed alpha
Helix 19	AC1	B	125	139	Right-handed alpha
Helix 20	AC2	B	149	154	Right-handed alpha
Helix 21	AC3	B	158	166	Right-handed alpha
Helix 22	AC4	B	180	191	Right-handed alpha
Helix 23	AC5	B	200	202	Right-handed 310
Helix 24	AC6	B	203	209	Right-handed alpha
Helix 25	AC7	B	219	236	Right-handed alpha
Helix 26	AC8	B	238	260	Right-handed alpha
Helix 27	AC9	B	260	272	Right-handed alpha
Helix 28	AD1	B	287	302	Right-handed alpha
Helix 29	AD2	C	33	47	Right-handed alpha
Helix 30	AD3	C	57	65	Right-handed 310
Helix 31	AD4	C	66	82	Right-handed alpha
Helix 32	AD5	C	95	110	Right-handed alpha
Helix 33	AD6	C	125	139	Right-handed alpha
Helix 34	AD7	C	149	154	Right-handed alpha
Helix 35	AD8	C	158	166	Right-handed alpha
Helix 36	AD9	C	180	191	Right-handed alpha
Helix 37	AE1	C	200	202	Right-handed 310
Helix 38	AE2	C	203	210	Right-handed alpha
Helix 39	AE3	C	219	236	Right-handed alpha
Helix 40	AE4	C	238	260	Right-handed alpha
Helix 41	AE5	C	260	271	Right-handed alpha
Helix 42	AE6	C	287	302	Right-handed alpha
Helix 43	AE7	D	33	47	Right-handed alpha
Helix 44	AE8	D	57	65	Right-handed 310
Helix 45	AE9	D	66	82	Right-handed alpha
Helix 46	AF1	D	95	109	Right-handed alpha
Helix 47	AF2	D	125	138	Right-handed alpha
Helix 48	AF3	D	158	166	Right-handed alpha
Helix 49	AF4	D	180	191	Right-handed alpha
Helix 50	AF5	D	200	202	Right-handed 310
Helix 51	AF6	D	203	209	Right-handed alpha
Helix 52	AF7	D	219	236	Right-handed alpha
Helix 53	AF8	D	238	260	Right-handed alpha
Helix 54	AF9	D	260	272	Right-handed alpha
Helix 55	AG1	D	287	302	Right-handed alpha
Helix 56	AG2	E	33	47	Right-handed alpha
Helix 57	AG3	E	57	65	Right-handed 310
Helix 58	AG4	E	66	82	Right-handed alpha
Helix 59	AG5	E	95	109	Right-handed alpha
Helix 60	AG6	E	125	139	Right-handed alpha
Helix 61	AG7	E	158	166	Right-handed alpha
Helix 62	AG8	E	180	191	Right-handed alpha
Helix 63	AG9	E	200	202	Right-handed 310
Helix 64	AH1	E	203	210	Right-handed alpha
Helix 65	AH2	E	219	236	Right-handed alpha
Helix 66	AH3	E	238	260	Right-handed alpha
Helix 67	AH4	E	260	271	Right-handed alpha
Helix 68	AH5	E	287	302	Right-handed alpha
Helix 69	AH6	F	33	47	Right-handed alpha
Helix 70	AH7	F	57	65	Right-handed 310
Helix 71	AH8	F	66	82	Right-handed alpha
Helix 72	AH9	F	95	109	Right-handed alpha
Helix 73	AI1	F	125	138	Right-handed alpha
Helix 74	AI2	F	149	154	Right-handed alpha
Helix 75	AI3	F	158	166	Right-handed alpha
Helix 76	AI4	F	180	191	Right-handed alpha
Helix 77	AI5	F	200	202	Right-handed 310
Helix 78	AI6	F	203	209	Right-handed alpha
Helix 79	AI7	F	219	236	Right-handed alpha
Helix 80	AI8	F	238	260	Right-handed alpha
Helix 81	AI9	F	260	271	Right-handed alpha
Helix 82	AJ1	F	287	302	Right-handed alpha
Helix 83	AJ2	G	33	47	Right-handed alpha
Helix 84	AJ3	G	57	65	Right-handed 310
Helix 85	AJ4	G	66	82	Right-handed alpha
Helix 86	AJ5	G	95	110	Right-handed alpha
Helix 87	AJ6	G	125	138	Right-handed alpha
Helix 88	AJ7	G	149	154	Right-handed alpha
Helix 89	AJ8	G	158	166	Right-handed alpha
Helix 90	AJ9	G	180	191	Right-handed alpha
Helix 91	AK1	G	200	202	Right-handed 310
Helix 92	AK2	G	203	209	Right-handed alpha
Helix 93	AK3	G	219	236	Right-handed alpha
Helix 94	AK4	G	238	260	Right-handed alpha
Helix 95	AK5	G	260	271	Right-handed alpha
Helix 96	AK6	G	287	302	Right-handed alpha
Helix 97	AK7	H	33	47	Right-handed alpha
Helix 98	AK8	H	57	65	Right-handed 310
Helix 99	AK9	H	66	82	Right-handed alpha
Helix 100	AL1	H	95	109	Right-handed alpha
Helix 101	AL2	H	125	138	Right-handed alpha
Helix 102	AL3	H	149	154	Right-handed alpha
Helix 103	AL4	H	158	166	Right-handed alpha
Helix 104	AL5	H	180	191	Right-handed alpha
Helix 105	AL6	H	200	202	Right-handed 310
Helix 106	AL7	H	203	209	Right-handed alpha
Helix 107	AL8	H	219	236	Right-handed alpha
Helix 108	AL9	H	238	260	Right-handed alpha
Helix 109	AM1	H	260	271	Right-handed alpha
Helix 110	AM2	H	287	302	Right-handed alpha

There are 8 sheets in PDB entry 4WOZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	17	21	first strand
Strand 2	A	52	55	parallel
Strand 3	A	86	90	parallel
Strand 4	A	113	117	parallel
Strand 5	A	144	147	parallel
Strand 6	A	171	176	parallel
Strand 7	A	195	198	parallel
Strand 8	A	214	217	parallel
Strand 9	A	17	21	parallel

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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	17	21	first strand
Strand 2	B	52	55	parallel
Strand 3	B	86	90	parallel
Strand 4	B	113	117	parallel
Strand 5	B	144	147	parallel
Strand 6	B	171	176	parallel
Strand 7	B	195	198	parallel
Strand 8	B	214	217	parallel
Strand 9	B	17	21	parallel

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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	17	21	first strand
Strand 2	C	52	55	parallel
Strand 3	C	86	90	parallel
Strand 4	C	113	117	parallel
Strand 5	C	144	148	parallel
Strand 6	C	171	176	parallel
Strand 7	C	195	198	parallel
Strand 8	C	214	217	parallel
Strand 9	C	17	21	parallel

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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	17	21	first strand
Strand 2	D	52	55	parallel
Strand 3	D	86	90	parallel
Strand 4	D	113	117	parallel
Strand 5	D	144	148	parallel
Strand 6	D	171	176	parallel
Strand 7	D	195	198	parallel
Strand 8	D	214	217	parallel
Strand 9	D	17	21	parallel

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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	17	21	first strand
Strand 2	E	52	55	parallel
Strand 3	E	86	90	parallel
Strand 4	E	113	117	parallel
Strand 5	E	144	147	parallel
Strand 6	E	171	176	parallel
Strand 7	E	195	198	parallel
Strand 8	E	214	217	parallel
Strand 9	E	17	21	parallel

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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	17	21	first strand
Strand 2	F	52	55	parallel
Strand 3	F	86	90	parallel
Strand 4	F	113	117	parallel
Strand 5	F	144	147	parallel
Strand 6	F	171	176	parallel
Strand 7	F	195	198	parallel
Strand 8	F	214	217	parallel
Strand 9	F	17	21	parallel

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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	17	21	first strand
Strand 2	G	52	55	parallel
Strand 3	G	86	90	parallel
Strand 4	G	113	117	parallel
Strand 5	G	144	147	parallel
Strand 6	G	171	176	parallel
Strand 7	G	195	198	parallel
Strand 8	G	214	217	parallel
Strand 9	G	17	21	parallel

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There are 9 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	17	21	first strand
Strand 2	H	52	55	parallel
Strand 3	H	86	90	parallel
Strand 4	H	113	117	parallel
Strand 5	H	144	147	parallel
Strand 6	H	171	176	parallel
Strand 7	H	195	198	parallel
Strand 8	H	214	217	parallel
Strand 9	H	17	21	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4WOZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
4WOZ