Analysis of interatomic Contacts of Structural Units in PDB entry:
4WPH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WPH entry

There are 4 chains in PDB entry 4WPH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 540ILE 885
B
 ARG 543LEU 881
C
 GLY 617ARG 626
D
 PRO 618ARG 626
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 4WPH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
542 561Right-handed alpha
Helix 2
AA2
A
573 576Right-handed 310
Helix 3
AA3
A
601 614Right-handed alpha
Helix 4
AA4
A
616 618Right-handed 310
Helix 5
AA5
A
647 652Right-handed alpha
Helix 6
AA6
A
666 671Right-handed alpha
Helix 7
AA7
A
712 715Right-handed 310
Helix 8
AA8
A
716 724Right-handed alpha
Helix 9
AA9
A
752 757Right-handed alpha
Helix 10
AB1
A
772 776Right-handed 310
Helix 11
AB2
A
782 792Right-handed alpha
Helix 12
AB3
A
818 831Right-handed alpha
Helix 13
AB4
A
833 835Right-handed 310
Helix 14
AB5
A
860 866Right-handed alpha
Helix 15
AB6
B
545 561Right-handed alpha
Helix 16
AB7
B
573 576Right-handed 310
Helix 17
AB8
B
601 614Right-handed alpha
Helix 18
AB9
B
616 618Right-handed 310
Helix 19
AC1
B
647 652Right-handed alpha
Helix 20
AC2
B
666 672Right-handed alpha
Helix 21
AC3
B
712 715Right-handed 310
Helix 22
AC4
B
716 724Right-handed alpha
Helix 23
AC5
B
752 757Right-handed alpha
Helix 24
AC6
B
772 778Right-handed 310
Helix 25
AC7
B
782 792Right-handed alpha
Helix 26
AC8
B
818 831Right-handed alpha
Helix 27
AC9
B
833 835Right-handed 310
Helix 28
AD1
B
860 866Right-handed alpha
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There are 6 sheets in PDB entry 4WPH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
592 597first strand
Strand 2
A
564 571anti-parallel
Strand 3
A
658 664parallel
Strand 4
A
620 627anti-parallel
Strand 5
A
633 635anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
698 708first strand
Strand 2
A
684 693anti-parallel
Strand 3
A
764 770parallel
Strand 4
A
732 739anti-parallel
Strand 5
A
742 745anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
809 814first strand
Strand 2
A
793 800anti-parallel
Strand 3
A
875 880parallel
Strand 4
A
837 842anti-parallel
Strand 5
A
849 852anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
592 597first strand
Strand 2
B
564 571anti-parallel
Strand 3
B
658 664parallel
Strand 4
B
620 627anti-parallel
Strand 5
B
633 635anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
698 708first strand
Strand 2
B
684 693anti-parallel
Strand 3
B
764 770parallel
Strand 4
B
732 739anti-parallel
Strand 5
B
742 745anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
809 814first strand
Strand 2
B
793 800anti-parallel
Strand 3
B
875 880parallel
Strand 4
B
837 842anti-parallel
Strand 5
B
849 852anti-parallel
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