Analysis of interatomic Contacts of Structural Units in PDB entry:
4WPX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WPX entry

There are 6 chains in PDB entry 4WPX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 6LYS 176
B
 LEU 1090THR 1170
C
 PRO 13LEU 159
D
 ARG 5LYS 176
E
 LEU 1090THR 1170
F
 PRO 13PRO 165
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 4WPX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 19Right-handed alpha
Helix 2
AA2
A
21 36Right-handed alpha
Helix 3
AA3
A
44 55Right-handed alpha
Helix 4
AA4
A
60 72Right-handed alpha
Helix 5
AA5
A
85 89Right-handed 310
Helix 6
AA6
A
92 107Right-handed alpha
Helix 7
AA7
A
109 121Right-handed alpha
Helix 8
AA8
A
129 141Right-handed alpha
Helix 9
AA9
A
145 155Right-handed alpha
Helix 10
AB1
A
166 175Right-handed alpha
Helix 11
AB2
B
1091 1101Right-handed alpha
Helix 12
AB3
B
1104 1138Right-handed alpha
Helix 13
AB4
B
1139 1169Right-handed alpha
Helix 14
AB5
C
28 40Right-handed alpha
Helix 15
AB6
C
43 56Right-handed alpha
Helix 16
AB7
C
59 75Right-handed alpha
Helix 17
AB8
C
79 93Right-handed alpha
Helix 18
AB9
C
141 158Right-handed alpha
Helix 19
AC1
D
14 19Right-handed alpha
Helix 20
AC2
D
21 36Right-handed alpha
Helix 21
AC3
D
44 55Right-handed alpha
Helix 22
AC4
D
60 72Right-handed alpha
Helix 23
AC5
D
85 89Right-handed 310
Helix 24
AC6
D
93 107Right-handed alpha
Helix 25
AC7
D
109 121Right-handed alpha
Helix 26
AC8
D
129 141Right-handed alpha
Helix 27
AC9
D
145 155Right-handed alpha
Helix 28
AD1
D
166 175Right-handed alpha
Helix 29
AD2
E
1091 1101Right-handed alpha
Helix 30
AD3
E
1104 1138Right-handed alpha
Helix 31
AD4
E
1139 1170Right-handed alpha
Helix 32
AD5
F
28 40Right-handed alpha
Helix 33
AD6
F
43 56Right-handed alpha
Helix 34
AD7
F
59 75Right-handed alpha
Helix 35
AD8
F
79 98Right-handed alpha
Helix 36
AD9
F
141 159Right-handed alpha
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There are 4 sheets in PDB entry 4WPX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
127 128first strand
Strand 2
A
164 165anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
42 43first strand
Strand 2
D
91 92anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
127 128first strand
Strand 2
D
164 165anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
14 15first strand
Strand 2
F
160 161parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il