Analysis of interatomic Contacts of Structural Units in PDB entry:
4WPZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WPZ entry

There are 2 chains in PDB entry 4WPZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 8VAL 19
A
 GLU 21TRP 404
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 4WPZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 31Right-handed alpha
Helix 2
AA2
A
51 61Right-handed alpha
Helix 3
AA3
A
80 88Right-handed alpha
Helix 4
AA4
A
89 92Right-handed 310
Helix 5
AA5
A
95 105Right-handed alpha
Helix 6
AA6
A
109 116Right-handed alpha
Helix 7
AA7
A
116 132Right-handed alpha
Helix 8
AA8
A
140 144Right-handed alpha
Helix 9
AA9
A
146 158Right-handed alpha
Helix 10
AB1
A
160 162Right-handed 310
Helix 11
AB2
A
163 175Right-handed alpha
Helix 12
AB3
A
180 205Right-handed alpha
Helix 13
AB4
A
209 220Right-handed alpha
Helix 14
AB5
A
225 241Right-handed alpha
Helix 15
AB6
A
241 257Right-handed alpha
Helix 16
AB7
A
258 264Right-handed alpha
Helix 17
AB8
A
268 270Right-handed 310
Helix 18
AB9
A
271 283Right-handed alpha
Helix 19
AC1
A
317 322Right-handed alpha
Helix 20
AC2
A
348 352Right-handed 310
Helix 21
AC3
A
355 374Right-handed alpha
Helix 22
AC4
A
382 386Right-handed 310
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There are 3 sheets in PDB entry 4WPZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 10first strand
Strand 2
A
35 39parallel
Strand 3
A
45 49anti-parallel
Strand 4
A
313 316parallel
Strand 5
A
294 296anti-parallel
Strand 6
A
64 65anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 139first strand
Strand 2
A
401 403anti-parallel
Strand 3
A
378 379anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
300 301first strand
Strand 2
A
307 308anti-parallel
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