Analysis of interatomic Contacts of Structural Units in PDB entry:
4WQ0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WQ0 entry

There is 1 chain in PDB entry 4WQ0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 8TRP 404
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 4WQ0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 32Right-handed alpha
Helix 2
AA2
A
51 61Right-handed alpha
Helix 3
AA3
A
69 77Right-handed alpha
Helix 4
AA4
A
79 88Right-handed alpha
Helix 5
AA5
A
93 106Right-handed alpha
Helix 6
AA6
A
109 132Right-handed alpha
Helix 7
AA7
A
140 144Right-handed alpha
Helix 8
AA8
A
147 158Right-handed alpha
Helix 9
AA9
A
163 176Right-handed alpha
Helix 10
AB1
A
180 205Right-handed alpha
Helix 11
AB2
A
209 220Right-handed alpha
Helix 12
AB3
A
225 258Right-handed alpha
Helix 13
AB4
A
258 263Right-handed alpha
Helix 14
AB5
A
264 266Right-handed 310
Helix 15
AB6
A
268 270Right-handed 310
Helix 16
AB7
A
271 283Right-handed alpha
Helix 17
AB8
A
317 322Right-handed alpha
Helix 18
AB9
A
348 352Right-handed 310
Helix 19
AC1
A
355 374Right-handed alpha
Helix 20
AC2
A
382 386Right-handed 310
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There are 3 sheets in PDB entry 4WQ0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 10first strand
Strand 2
A
35 39parallel
Strand 3
A
45 49anti-parallel
Strand 4
A
313 316parallel
Strand 5
A
294 296anti-parallel
Strand 6
A
64 65anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 139first strand
Strand 2
A
401 403anti-parallel
Strand 3
A
378 379anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
300 301first strand
Strand 2
A
307 308anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il