Analysis of interatomic Contacts of Structural Units in PDB entry:
4WQ5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WQ5 entry

There are 4 chains in PDB entry 4WQ5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 332
B
 MET 1ALA 336
C
 MET 1PRO 228
D
 MET 1PRO 228
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 4WQ5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
32 38Right-handed alpha
Helix 2
AA2
A
43 67Right-handed alpha
Helix 3
AA3
A
69 73Right-handed 310
Helix 4
AA4
A
84 103Right-handed alpha
Helix 5
AA5
A
111 118Right-handed alpha
Helix 6
AA6
A
119 122Right-handed 310
Helix 7
AA7
A
161 173Right-handed alpha
Helix 8
AA8
A
179 188Right-handed alpha
Helix 9
AA9
A
211 224Right-handed alpha
Helix 10
AB1
A
228 259Right-handed alpha
Helix 11
AB2
A
267 271Right-handed 310
Helix 12
AB3
A
272 286Right-handed alpha
Helix 13
AB4
A
294 299Right-handed alpha
Helix 14
AB5
A
302 315Right-handed alpha
Helix 15
AB6
B
32 38Right-handed alpha
Helix 16
AB7
B
43 67Right-handed alpha
Helix 17
AB8
B
69 73Right-handed 310
Helix 18
AB9
B
84 103Right-handed alpha
Helix 19
AC1
B
111 118Right-handed alpha
Helix 20
AC2
B
119 122Right-handed 310
Helix 21
AC3
B
161 173Right-handed alpha
Helix 22
AC4
B
179 189Right-handed alpha
Helix 23
AC5
B
211 225Right-handed alpha
Helix 24
AC6
B
228 259Right-handed alpha
Helix 25
AC7
B
267 271Right-handed 310
Helix 26
AC8
B
272 286Right-handed alpha
Helix 27
AC9
B
294 298Right-handed 310
Helix 28
AD1
B
302 315Right-handed alpha
Helix 29
AD2
B
330 334Right-handed 310
Helix 30
AD3
C
33 49Right-handed alpha
Helix 31
AD4
C
52 56Right-handed 310
Helix 32
AD5
C
67 86Right-handed alpha
Helix 33
AD6
C
94 107Right-handed alpha
Helix 34
AD7
C
137 141Right-handed 310
Helix 35
AD8
C
145 154Right-handed alpha
Helix 36
AD9
C
164 170Right-handed alpha
Helix 37
AE1
C
190 193Right-handed 310
Helix 38
AE2
C
194 204Right-handed alpha
Helix 39
AE3
C
209 213Right-handed 310
Helix 40
AE4
D
33 49Right-handed alpha
Helix 41
AE5
D
52 56Right-handed 310
Helix 42
AE6
D
67 86Right-handed alpha
Helix 43
AE7
D
94 107Right-handed alpha
Helix 44
AE8
D
137 141Right-handed 310
Helix 45
AE9
D
145 154Right-handed alpha
Helix 46
AF1
D
165 170Right-handed alpha
Helix 47
AF2
D
190 192Right-handed 310
Helix 48
AF3
D
193 204Right-handed alpha
Helix 49
AF4
D
209 213Right-handed 310
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There are 10 sheets in PDB entry 4WQ5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 31first strand
Strand 2
A
12 19anti-parallel
Strand 3
A
2 7anti-parallel
Strand 4
A
75 81parallel
Strand 5
A
106 110parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 156first strand
Strand 2
A
140 147anti-parallel
Strand 3
A
130 135anti-parallel
Strand 4
A
262 266parallel
Strand 5
A
289 291parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
23 31first strand
Strand 2
B
12 19anti-parallel
Strand 3
B
2 7anti-parallel
Strand 4
B
75 81parallel
Strand 5
B
106 110parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
150 156first strand
Strand 2
B
140 147anti-parallel
Strand 3
B
130 135anti-parallel
Strand 4
B
262 266parallel
Strand 5
B
289 291parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
23 29first strand
Strand 2
C
12 19anti-parallel
Strand 3
C
2 7anti-parallel
Strand 4
C
58 64parallel
Strand 5
C
89 93parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
135 136first strand
Strand 2
C
121 129anti-parallel
Strand 3
C
142 144anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
135 136first strand
Strand 2
C
121 129anti-parallel
Strand 3
C
110 118anti-parallel
Strand 4
C
159 163parallel
Strand 5
C
180 183parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
22 29first strand
Strand 2
D
12 19anti-parallel
Strand 3
D
2 7anti-parallel
Strand 4
D
58 64parallel
Strand 5
D
89 93parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
135 136first strand
Strand 2
D
121 129anti-parallel
Strand 3
D
142 144anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
135 136first strand
Strand 2
D
121 129anti-parallel
Strand 3
D
110 118anti-parallel
Strand 4
D
159 163parallel
Strand 5
D
180 183parallel
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