Analysis of interatomic Contacts of Structural Units in PDB entry:
4WQM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WQM entry

There is 1 chain in PDB entry 4WQM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1PHE 326
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 4WQM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 28Right-handed alpha
Helix 2
AA2
A
64 70Right-handed alpha
Helix 3
AA3
A
169 178Right-handed alpha
Helix 4
AA4
A
210 224Right-handed alpha
Helix 5
AA5
A
238 249Right-handed alpha
Helix 6
AA6
A
276 281Right-handed alpha
Helix 7
AA7
A
282 289Right-handed 310
Helix 8
AA8
A
298 311Right-handed alpha
Helix 9
AA9
A
316 318Right-handed 310
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There are 4 sheets in PDB entry 4WQM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 15first strand
Strand 2
A
2 5anti-parallel
Strand 3
A
84 88parallel
Strand 4
A
45 50anti-parallel
Strand 5
A
72 74anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 55first strand
Strand 2
A
78 80anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 149first strand
Strand 2
A
135 140anti-parallel
Strand 3
A
182 189anti-parallel
Strand 4
A
101 112anti-parallel
Strand 5
A
117 123anti-parallel
Strand 6
A
158 164anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
255 261first strand
Strand 2
A
230 236parallel
Strand 3
A
202 207parallel
Strand 4
A
292 297parallel
Strand 5
A
320 324parallel
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