Analysis of interatomic Contacts of Structural Units in PDB entry:
4WR3

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4WR3 entry

There are 4 chains in PDB entry 4WR3 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ASP 359
B	GLN 2	ASP 359
C	ALA 3	ASP 359
D	ALA 3	ASP 359

There are 65 helices in PDB entry 4WR3. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	10	24	Right-handed alpha
Helix 2	AA2	A	33	39	Right-handed alpha
Helix 3	AA3	A	41	49	Right-handed alpha
Helix 4	AA4	A	59	69	Right-handed alpha
Helix 5	AA5	A	83	85	Right-handed 310
Helix 6	AA6	A	86	93	Right-handed alpha
Helix 7	AA7	A	101	111	Right-handed alpha
Helix 8	AA8	A	133	146	Right-handed alpha
Helix 9	AA9	A	169	183	Right-handed alpha
Helix 10	AB1	A	193	200	Right-handed alpha
Helix 11	AB2	A	201	204	Right-handed 310
Helix 12	AB3	A	211	216	Right-handed 310
Helix 13	AB4	A	225	230	Right-handed 310
Helix 14	AB5	A	254	258	Right-handed 310
Helix 15	AB6	A	330	339	Right-handed alpha
Helix 16	AB7	A	341	348	Right-handed alpha
Helix 17	AB8	B	10	24	Right-handed alpha
Helix 18	AB9	B	33	39	Right-handed alpha
Helix 19	AC1	B	41	49	Right-handed alpha
Helix 20	AC2	B	59	69	Right-handed alpha
Helix 21	AC3	B	83	85	Right-handed 310
Helix 22	AC4	B	86	94	Right-handed alpha
Helix 23	AC5	B	101	111	Right-handed alpha
Helix 24	AC6	B	133	146	Right-handed alpha
Helix 25	AC7	B	169	183	Right-handed alpha
Helix 26	AC8	B	193	200	Right-handed alpha
Helix 27	AC9	B	201	204	Right-handed 310
Helix 28	AD1	B	211	216	Right-handed 310
Helix 29	AD2	B	225	230	Right-handed 310
Helix 30	AD3	B	254	258	Right-handed 310
Helix 31	AD4	B	330	339	Right-handed alpha
Helix 32	AD5	B	341	348	Right-handed alpha
Helix 33	AD6	C	10	24	Right-handed alpha
Helix 34	AD7	C	33	39	Right-handed alpha
Helix 35	AD8	C	41	49	Right-handed alpha
Helix 36	AD9	C	59	69	Right-handed alpha
Helix 37	AE1	C	83	85	Right-handed 310
Helix 38	AE2	C	86	94	Right-handed alpha
Helix 39	AE3	C	101	111	Right-handed alpha
Helix 40	AE4	C	133	147	Right-handed alpha
Helix 41	AE5	C	169	183	Right-handed alpha
Helix 42	AE6	C	193	200	Right-handed alpha
Helix 43	AE7	C	201	204	Right-handed 310
Helix 44	AE8	C	211	216	Right-handed 310
Helix 45	AE9	C	225	230	Right-handed 310
Helix 46	AF1	C	254	258	Right-handed 310
Helix 47	AF2	C	330	339	Right-handed alpha
Helix 48	AF3	C	341	348	Right-handed alpha
Helix 49	AF4	D	10	24	Right-handed alpha
Helix 50	AF5	D	33	39	Right-handed alpha
Helix 51	AF6	D	41	49	Right-handed alpha
Helix 52	AF7	D	59	69	Right-handed alpha
Helix 53	AF8	D	83	85	Right-handed 310
Helix 54	AF9	D	86	93	Right-handed alpha
Helix 55	AG1	D	101	111	Right-handed alpha
Helix 56	AG2	D	133	135	Right-handed 310
Helix 57	AG3	D	136	145	Right-handed alpha
Helix 58	AG4	D	169	183	Right-handed alpha
Helix 59	AG5	D	193	200	Right-handed alpha
Helix 60	AG6	D	201	204	Right-handed 310
Helix 61	AG7	D	211	216	Right-handed 310
Helix 62	AG8	D	225	230	Right-handed 310
Helix 63	AG9	D	254	258	Right-handed 310
Helix 64	AH1	D	330	339	Right-handed alpha
Helix 65	AH2	D	341	348	Right-handed alpha

There are 15 sheets in PDB entry 4WR3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	293	296	first strand
Strand 2	A	287	290	anti-parallel
Strand 3	A	321	325	anti-parallel
Strand 4	A	235	247	anti-parallel
Strand 5	A	265	271	anti-parallel
Strand 6	A	305	309	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	293	296	first strand
Strand 2	A	287	290	anti-parallel
Strand 3	A	321	325	anti-parallel
Strand 4	A	235	247	anti-parallel
Strand 5	A	5	9	anti-parallel
Strand 6	A	354	358	parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	189	190	first strand
Strand 2	A	155	157	parallel
Strand 3	A	119	122	parallel
Strand 4	A	95	99	parallel
Strand 5	A	75	77	parallel
Strand 6	A	54	57	parallel
Strand 7	A	28	32	parallel
Strand 8	A	207	208	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	252	253	first strand
Strand 2	A	259	260	anti-parallel

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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	354	358	first strand
Strand 2	B	5	9	parallel
Strand 3	B	235	247	anti-parallel
Strand 4	B	321	325	anti-parallel
Strand 5	B	287	290	anti-parallel
Strand 6	B	293	298	anti-parallel
Strand 7	B	306	309	anti-parallel
Strand 8	B	265	270	anti-parallel
Strand 9	B	235	247	anti-parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	189	190	first strand
Strand 2	B	155	157	parallel
Strand 3	B	119	122	parallel
Strand 4	B	95	99	parallel
Strand 5	B	75	77	parallel
Strand 6	B	54	57	parallel
Strand 7	B	28	32	parallel
Strand 8	B	207	208	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	252	253	first strand
Strand 2	B	259	260	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	293	296	first strand
Strand 2	C	287	290	anti-parallel
Strand 3	C	321	325	anti-parallel
Strand 4	C	235	247	anti-parallel
Strand 5	C	265	270	anti-parallel
Strand 6	C	306	309	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	293	296	first strand
Strand 2	C	287	290	anti-parallel
Strand 3	C	321	325	anti-parallel
Strand 4	C	235	247	anti-parallel
Strand 5	C	5	9	anti-parallel
Strand 6	C	354	358	parallel

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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	189	190	first strand
Strand 2	C	150	157	parallel
Strand 3	C	117	122	parallel
Strand 4	C	96	99	parallel
Strand 5	C	75	77	parallel
Strand 6	C	54	57	parallel
Strand 7	C	28	32	parallel
Strand 8	C	207	208	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	252	253	first strand
Strand 2	C	259	260	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	293	296	first strand
Strand 2	D	287	290	anti-parallel
Strand 3	D	321	325	anti-parallel
Strand 4	D	235	247	anti-parallel
Strand 5	D	265	270	anti-parallel
Strand 6	D	306	309	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	293	296	first strand
Strand 2	D	287	290	anti-parallel
Strand 3	D	321	325	anti-parallel
Strand 4	D	235	247	anti-parallel
Strand 5	D	5	9	anti-parallel
Strand 6	D	354	358	parallel

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There are 8 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	189	190	first strand
Strand 2	D	155	157	parallel
Strand 3	D	119	122	parallel
Strand 4	D	95	99	parallel
Strand 5	D	75	77	parallel
Strand 6	D	54	57	parallel
Strand 7	D	28	32	parallel
Strand 8	D	207	208	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	252	253	first strand
Strand 2	D	259	260	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4WR3

Analysis of interatomic Contacts of Structural Units in PDB entry:
4WR3