Analysis of interatomic Contacts of Structural Units in PDB entry:
4WSH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WSH entry

There are 2 chains in PDB entry 4WSH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 355
B
 ALA 3GLY 355
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 4WSH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 14Right-handed alpha
Helix 2
AA2
A
33 44Right-handed alpha
Helix 3
AA3
A
45 51Right-handed alpha
Helix 4
AA4
A
52 67Right-handed alpha
Helix 5
AA5
A
80 86Right-handed alpha
Helix 6
AA6
A
106 113Right-handed alpha
Helix 7
AA7
A
117 122Right-handed alpha
Helix 8
AA8
A
122 137Right-handed alpha
Helix 9
AA9
A
148 159Right-handed alpha
Helix 10
AB1
A
165 175Right-handed alpha
Helix 11
AB2
A
175 201Right-handed alpha
Helix 12
AB3
A
211 215Right-handed 310
Helix 13
AB4
A
216 224Right-handed alpha
Helix 14
AB5
A
224 235Right-handed alpha
Helix 15
AB6
A
253 255Right-handed 310
Helix 16
AB7
A
256 261Right-handed alpha
Helix 17
AB8
A
275 284Right-handed alpha
Helix 18
AB9
A
294 300Right-handed 310
Helix 19
AC1
A
301 317Right-handed alpha
Helix 20
AC2
A
335 351Right-handed alpha
Helix 21
AC3
A
352 354Right-handed 310
Helix 22
AC4
B
7 14Right-handed alpha
Helix 23
AC5
B
33 44Right-handed alpha
Helix 24
AC6
B
45 52Right-handed alpha
Helix 25
AC7
B
52 67Right-handed alpha
Helix 26
AC8
B
80 86Right-handed alpha
Helix 27
AC9
B
106 113Right-handed alpha
Helix 28
AD1
B
117 122Right-handed alpha
Helix 29
AD2
B
122 137Right-handed alpha
Helix 30
AD3
B
148 159Right-handed alpha
Helix 31
AD4
B
165 175Right-handed alpha
Helix 32
AD5
B
175 201Right-handed alpha
Helix 33
AD6
B
211 215Right-handed 310
Helix 34
AD7
B
216 224Right-handed alpha
Helix 35
AD8
B
224 235Right-handed alpha
Helix 36
AD9
B
253 255Right-handed 310
Helix 37
AE1
B
256 261Right-handed alpha
Helix 38
AE2
B
275 284Right-handed alpha
Helix 39
AE3
B
294 300Right-handed 310
Helix 40
AE4
B
301 317Right-handed alpha
Helix 41
AE5
B
335 351Right-handed alpha
Helix 42
AE6
B
352 354Right-handed 310
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There are 5 sheets in PDB entry 4WSH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 74first strand
Strand 2
A
142 147parallel
Strand 3
A
204 209parallel
Strand 4
A
246 250parallel
Strand 5
A
267 269parallel
Strand 6
A
288 290parallel
Strand 7
A
322 323parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 92first strand
Strand 2
A
98 100anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 239first strand
Strand 2
A
242 243anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
73 74first strand
Strand 2
B
142 147parallel
Strand 3
B
204 208parallel
Strand 4
B
246 249parallel
Strand 5
B
267 269parallel
Strand 6
B
288 293parallel
Strand 7
B
322 326parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
238 239first strand
Strand 2
B
242 243anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il