Analysis of interatomic Contacts of Structural Units in PDB entry:
4WT7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WT7 entry

There are 2 chains in PDB entry 4WT7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 43GLY 336
B
 SER 46LEU 335
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 4WT7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
61 78Right-handed alpha
Helix 2
AA2
A
90 105Right-handed alpha
Helix 3
AA3
A
115 129Right-handed alpha
Helix 4
AA4
A
150 166Right-handed alpha
Helix 5
AA5
A
181 196Right-handed alpha
Helix 6
AA6
A
214 230Right-handed alpha
Helix 7
AA7
A
243 258Right-handed alpha
Helix 8
AA8
A
270 278Right-handed alpha
Helix 9
AA9
A
291 308Right-handed alpha
Helix 10
AB1
A
327 336Right-handed alpha
Helix 11
AB2
B
61 78Right-handed alpha
Helix 12
AB3
B
90 104Right-handed alpha
Helix 13
AB4
B
115 129Right-handed alpha
Helix 14
AB5
B
150 166Right-handed alpha
Helix 15
AB6
B
181 196Right-handed alpha
Helix 16
AB7
B
214 230Right-handed alpha
Helix 17
AB8
B
243 258Right-handed alpha
Helix 18
AB9
B
270 279Right-handed alpha
Helix 19
AC1
B
291 308Right-handed alpha
Helix 20
AC2
B
327 333Right-handed alpha
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There are 4 sheets in PDB entry 4WT7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 86first strand
Strand 2
A
51 56parallel
Strand 3
A
108 112parallel
Strand 4
A
133 136parallel
Strand 5
A
146 148parallel
Strand 6
A
315 317parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 203first strand
Strand 2
A
170 175parallel
Strand 3
A
238 241parallel
Strand 4
A
263 268parallel
Strand 5
A
284 289parallel
Strand 6
A
321 324anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
81 86first strand
Strand 2
B
51 56parallel
Strand 3
B
108 112parallel
Strand 4
B
133 136parallel
Strand 5
B
146 149parallel
Strand 6
B
315 318parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
201 203first strand
Strand 2
B
170 175parallel
Strand 3
B
238 241parallel
Strand 4
B
263 268parallel
Strand 5
B
284 289parallel
Strand 6
B
321 324anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il