Analysis of interatomic Contacts of Structural Units in PDB entry:
4WTV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WTV entry

There are 2 chains in PDB entry 4WTV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 98GLU 450
B
 MET 97GLU 450
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 4WTV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
103 119Right-handed alpha
Helix 2
AA2
A
1001 1011Right-handed alpha
Helix 3
AA3
A
1037 1050Right-handed alpha
Helix 4
AA4
A
1058 1079Right-handed alpha
Helix 5
AA5
A
1082 1090Right-handed alpha
Helix 6
AA6
A
1091 1106Right-handed alpha
Helix 7
AA7
A
1106 1112Right-handed alpha
Helix 8
AA8
A
1113 1122Right-handed alpha
Helix 9
AA9
A
1124 1134Right-handed alpha
Helix 10
AB1
A
1135 1141Right-handed alpha
Helix 11
AB2
A
1141 1155Right-handed alpha
Helix 12
AB3
A
1157 1162Right-handed alpha
Helix 13
AB4
A
184 200Right-handed alpha
Helix 14
AB5
A
266 273Right-handed alpha
Helix 15
AB6
A
279 300Right-handed alpha
Helix 16
AB7
A
362 372Right-handed 310
Helix 17
AB8
A
375 387Right-handed alpha
Helix 18
AB9
A
388 404Right-handed alpha
Helix 19
AC1
A
410 434Right-handed alpha
Helix 20
AC2
A
437 442Right-handed alpha
Helix 21
AC3
B
103 119Right-handed alpha
Helix 22
AC4
B
151 153Right-handed 310
Helix 23
AC5
B
1001 1011Right-handed alpha
Helix 24
AC6
B
1058 1079Right-handed alpha
Helix 25
AC7
B
1082 1090Right-handed alpha
Helix 26
AC8
B
1091 1112Right-handed alpha
Helix 27
AC9
B
1113 1122Right-handed alpha
Helix 28
AD1
B
1124 1134Right-handed alpha
Helix 29
AD2
B
1135 1141Right-handed alpha
Helix 30
AD3
B
1141 1155Right-handed alpha
Helix 31
AD4
B
1157 1162Right-handed alpha
Helix 32
AD5
B
184 200Right-handed alpha
Helix 33
AD6
B
266 276Right-handed alpha
Helix 34
AD7
B
279 300Right-handed alpha
Helix 35
AD8
B
362 372Right-handed 310
Helix 36
AD9
B
375 387Right-handed alpha
Helix 37
AE1
B
388 404Right-handed alpha
Helix 38
AE2
B
410 435Right-handed alpha
Helix 39
AE3
B
437 442Right-handed alpha
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There are 6 sheets in PDB entry 4WTV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 125first strand
Strand 2
A
134 137anti-parallel
Strand 3
A
143 149anti-parallel
Strand 4
A
252 258anti-parallel
Strand 5
A
207 212anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1013 1018first strand
Strand 2
A
1024 1027anti-parallel
Strand 3
A
1030 1033anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
264 265first strand
Strand 2
A
310 314anti-parallel
Strand 3
A
338 342anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
124 125first strand
Strand 2
B
134 137anti-parallel
Strand 3
B
143 149anti-parallel
Strand 4
B
252 258anti-parallel
Strand 5
B
207 212anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1017 1018first strand
Strand 2
B
1024 1025anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
264 265first strand
Strand 2
B
310 314anti-parallel
Strand 3
B
338 342anti-parallel
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