Analysis of interatomic Contacts of Structural Units in PDB entry:
4WU3

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4WU3 entry

There are 4 chains in PDB entry 4WU3 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 47	ALA 636
B	PRO 47	ALA 636
C	PRO 47	ALA 636
D	PRO 47	ALA 636

There are 88 helices in PDB entry 4WU3. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	93	97	Right-handed 310
Helix 2	AA2	A	106	117	Right-handed alpha
Helix 3	AA3	A	120	122	Right-handed 310
Helix 4	AA4	A	146	150	Right-handed 310
Helix 5	AA5	A	156	170	Right-handed alpha
Helix 6	AA6	A	202	210	Right-handed alpha
Helix 7	AA7	A	226	239	Right-handed alpha
Helix 8	AA8	A	254	270	Right-handed alpha
Helix 9	AA9	A	274	285	Right-handed alpha
Helix 10	AB1	A	298	322	Right-handed alpha
Helix 11	AB2	A	328	336	Right-handed alpha
Helix 12	AB3	A	376	380	Right-handed 310
Helix 13	AB4	A	392	397	Right-handed alpha
Helix 14	AB5	A	405	420	Right-handed alpha
Helix 15	AB6	A	448	450	Right-handed 310
Helix 16	AB7	A	456	472	Right-handed alpha
Helix 17	AB8	A	500	508	Right-handed alpha
Helix 18	AB9	A	524	538	Right-handed alpha
Helix 19	AC1	A	552	567	Right-handed alpha
Helix 20	AC2	A	571	582	Right-handed alpha
Helix 21	AC3	A	600	622	Right-handed alpha
Helix 22	AC4	A	629	635	Right-handed alpha
Helix 23	AC5	B	93	97	Right-handed 310
Helix 24	AC6	B	106	117	Right-handed alpha
Helix 25	AC7	B	120	122	Right-handed 310
Helix 26	AC8	B	146	150	Right-handed 310
Helix 27	AC9	B	156	170	Right-handed alpha
Helix 28	AD1	B	202	209	Right-handed alpha
Helix 29	AD2	B	226	239	Right-handed alpha
Helix 30	AD3	B	254	270	Right-handed alpha
Helix 31	AD4	B	274	285	Right-handed alpha
Helix 32	AD5	B	298	322	Right-handed alpha
Helix 33	AD6	B	328	336	Right-handed alpha
Helix 34	AD7	B	376	380	Right-handed 310
Helix 35	AD8	B	392	396	Right-handed 310
Helix 36	AD9	B	405	420	Right-handed alpha
Helix 37	AE1	B	446	450	Right-handed 310
Helix 38	AE2	B	456	472	Right-handed alpha
Helix 39	AE3	B	500	508	Right-handed alpha
Helix 40	AE4	B	524	538	Right-handed alpha
Helix 41	AE5	B	552	567	Right-handed alpha
Helix 42	AE6	B	571	582	Right-handed alpha
Helix 43	AE7	B	600	622	Right-handed alpha
Helix 44	AE8	B	629	635	Right-handed alpha
Helix 45	AE9	C	93	97	Right-handed 310
Helix 46	AF1	C	106	117	Right-handed alpha
Helix 47	AF2	C	120	122	Right-handed 310
Helix 48	AF3	C	146	150	Right-handed 310
Helix 49	AF4	C	156	170	Right-handed alpha
Helix 50	AF5	C	202	209	Right-handed alpha
Helix 51	AF6	C	226	239	Right-handed alpha
Helix 52	AF7	C	254	270	Right-handed alpha
Helix 53	AF8	C	274	285	Right-handed alpha
Helix 54	AF9	C	298	322	Right-handed alpha
Helix 55	AG1	C	328	336	Right-handed alpha
Helix 56	AG2	C	376	380	Right-handed 310
Helix 57	AG3	C	392	396	Right-handed 310
Helix 58	AG4	C	405	420	Right-handed alpha
Helix 59	AG5	C	448	450	Right-handed 310
Helix 60	AG6	C	456	472	Right-handed alpha
Helix 61	AG7	C	500	508	Right-handed alpha
Helix 62	AG8	C	524	538	Right-handed alpha
Helix 63	AG9	C	552	567	Right-handed alpha
Helix 64	AH1	C	571	582	Right-handed alpha
Helix 65	AH2	C	600	622	Right-handed alpha
Helix 66	AH3	C	629	635	Right-handed alpha
Helix 67	AH4	D	93	97	Right-handed 310
Helix 68	AH5	D	106	117	Right-handed alpha
Helix 69	AH6	D	120	122	Right-handed 310
Helix 70	AH7	D	146	150	Right-handed 310
Helix 71	AH8	D	156	170	Right-handed alpha
Helix 72	AH9	D	202	209	Right-handed alpha
Helix 73	AI1	D	226	239	Right-handed alpha
Helix 74	AI2	D	254	270	Right-handed alpha
Helix 75	AI3	D	274	285	Right-handed alpha
Helix 76	AI4	D	298	322	Right-handed alpha
Helix 77	AI5	D	328	336	Right-handed alpha
Helix 78	AI6	D	376	380	Right-handed 310
Helix 79	AI7	D	392	396	Right-handed 310
Helix 80	AI8	D	405	420	Right-handed alpha
Helix 81	AI9	D	448	450	Right-handed 310
Helix 82	AJ1	D	456	472	Right-handed alpha
Helix 83	AJ2	D	500	508	Right-handed alpha
Helix 84	AJ3	D	524	538	Right-handed alpha
Helix 85	AJ4	D	552	567	Right-handed alpha
Helix 86	AJ5	D	571	582	Right-handed alpha
Helix 87	AJ6	D	600	622	Right-handed alpha
Helix 88	AJ7	D	629	635	Right-handed alpha

There are 20 sheets in PDB entry 4WU3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	57	62	first strand
Strand 2	A	140	145	anti-parallel
Strand 3	A	134	137	anti-parallel
Strand 4	A	200	201	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	73	74	first strand
Strand 2	A	99	102	anti-parallel
Strand 3	A	245	249	parallel
Strand 4	A	124	130	parallel
Strand 5	A	213	219	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	176	183	first strand
Strand 2	A	188	196	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	492	494	first strand
Strand 2	A	475	479	anti-parallel
Strand 3	A	347	354	parallel
Strand 4	A	440	446	anti-parallel
Strand 5	A	434	437	anti-parallel
Strand 6	A	498	499	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	365	366	first strand
Strand 2	A	398	401	anti-parallel
Strand 3	A	543	547	parallel
Strand 4	A	424	430	parallel
Strand 5	A	511	517	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	57	62	first strand
Strand 2	B	140	145	anti-parallel
Strand 3	B	134	137	anti-parallel
Strand 4	B	200	201	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	73	74	first strand
Strand 2	B	99	102	anti-parallel
Strand 3	B	245	249	parallel
Strand 4	B	124	130	parallel
Strand 5	B	213	219	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	176	183	first strand
Strand 2	B	188	196	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	492	494	first strand
Strand 2	B	475	479	anti-parallel
Strand 3	B	349	354	parallel
Strand 4	B	440	445	anti-parallel
Strand 5	B	434	437	anti-parallel
Strand 6	B	498	499	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	365	366	first strand
Strand 2	B	398	401	anti-parallel
Strand 3	B	543	547	parallel
Strand 4	B	424	430	parallel
Strand 5	B	511	517	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	57	62	first strand
Strand 2	C	140	145	anti-parallel
Strand 3	C	134	137	anti-parallel
Strand 4	C	200	201	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	73	74	first strand
Strand 2	C	99	102	anti-parallel
Strand 3	C	245	249	parallel
Strand 4	C	124	130	parallel
Strand 5	C	213	219	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	176	183	first strand
Strand 2	C	188	196	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	492	494	first strand
Strand 2	C	475	479	anti-parallel
Strand 3	C	347	354	parallel
Strand 4	C	440	446	anti-parallel
Strand 5	C	434	437	anti-parallel
Strand 6	C	498	499	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	365	366	first strand
Strand 2	C	398	401	anti-parallel
Strand 3	C	543	547	parallel
Strand 4	C	424	430	parallel
Strand 5	C	511	517	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	57	62	first strand
Strand 2	D	140	145	anti-parallel
Strand 3	D	134	137	anti-parallel
Strand 4	D	200	201	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	73	74	first strand
Strand 2	D	99	102	anti-parallel
Strand 3	D	245	249	parallel
Strand 4	D	124	130	parallel
Strand 5	D	213	219	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	176	183	first strand
Strand 2	D	188	196	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	492	494	first strand
Strand 2	D	475	479	anti-parallel
Strand 3	D	347	354	parallel
Strand 4	D	440	446	anti-parallel
Strand 5	D	434	437	anti-parallel
Strand 6	D	498	499	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	365	366	first strand
Strand 2	D	398	401	anti-parallel
Strand 3	D	543	547	parallel
Strand 4	D	424	430	parallel
Strand 5	D	511	517	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4WU3

Analysis of interatomic Contacts of Structural Units in PDB entry:
4WU3