Analysis of interatomic Contacts of Structural Units in PDB entry:
4WUJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WUJ entry

There are 4 chains in PDB entry 4WUJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 61LEU 207
B
 GLY 61LEU 207
C
 ALA 62GLU 206
D
 GLY 61LEU 207
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 4WUJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
73 83Right-handed alpha
Helix 2
AA2
A
116 124Right-handed alpha
Helix 3
AA3
A
126 131Right-handed alpha
Helix 4
AA4
A
134 140Right-handed 310
Helix 5
AA5
A
151 163Right-handed alpha
Helix 6
AA6
B
73 83Right-handed alpha
Helix 7
AA7
B
116 124Right-handed alpha
Helix 8
AA8
B
126 131Right-handed alpha
Helix 9
AA9
B
134 140Right-handed 310
Helix 10
AB1
B
152 164Right-handed alpha
Helix 11
AB2
C
73 83Right-handed alpha
Helix 12
AB3
C
116 124Right-handed alpha
Helix 13
AB4
C
126 131Right-handed alpha
Helix 14
AB5
C
134 140Right-handed 310
Helix 15
AB6
C
151 164Right-handed alpha
Helix 16
AB7
D
73 84Right-handed alpha
Helix 17
AB8
D
116 124Right-handed alpha
Helix 18
AB9
D
126 131Right-handed alpha
Helix 19
AC1
D
134 140Right-handed 310
Helix 20
AC2
D
152 163Right-handed alpha
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There are 4 sheets in PDB entry 4WUJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 115first strand
Strand 2
A
99 104anti-parallel
Strand 3
A
199 204anti-parallel
Strand 4
A
180 188anti-parallel
Strand 5
A
167 174anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
112 115first strand
Strand 2
B
99 104anti-parallel
Strand 3
B
199 204anti-parallel
Strand 4
B
180 188anti-parallel
Strand 5
B
167 174anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
112 115first strand
Strand 2
C
99 104anti-parallel
Strand 3
C
199 204anti-parallel
Strand 4
C
180 189anti-parallel
Strand 5
C
167 174anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
112 115first strand
Strand 2
D
99 104anti-parallel
Strand 3
D
199 204anti-parallel
Strand 4
D
180 188anti-parallel
Strand 5
D
167 174anti-parallel
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