Analysis of interatomic Contacts of Structural Units in PDB entry:
4WUT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WUT entry

There is 1 chain in PDB entry 4WUT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 24TYR 313
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 4WUT. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
35 50Right-handed alpha
Helix 2
AA2
A
67 81Right-handed alpha
Helix 3
AA3
A
96 106Right-handed alpha
Helix 4
AA4
A
118 125Right-handed 310
Helix 5
AA5
A
132 149Right-handed alpha
Helix 6
AA6
A
163 181Right-handed alpha
Helix 7
AA7
A
194 209Right-handed alpha
Helix 8
AA8
A
219 233Right-handed alpha
Helix 9
AA9
A
247 256Right-handed alpha
Helix 10
AB1
A
266 283Right-handed alpha
Helix 11
AB2
A
305 310Right-handed alpha
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There are 2 sheets in PDB entry 4WUT. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
56 60first strand
Strand 2
A
25 29parallel
Strand 3
A
85 88parallel
Strand 4
A
110 113parallel
Strand 5
A
127 130parallel
Strand 6
A
290 292parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
184 190first strand
Strand 2
A
153 158parallel
Strand 3
A
214 217parallel
Strand 4
A
240 244parallel
Strand 5
A
261 265parallel
Strand 6
A
295 298anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il