Analysis of interatomic Contacts of Structural Units in PDB entry:
4WUZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WUZ entry

There are 5 chains in PDB entry 4WUZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 226
B
 MET 1ARG 226
C
 THR 2ARG 226
D
 T 1 G 12
E
 A 1 A 14
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 4WUZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 11Right-handed alpha
Helix 2
AA2
A
13 17Right-handed 310
Helix 3
AA3
A
21 27Right-handed alpha
Helix 4
AA4
A
36 42Right-handed alpha
Helix 5
AA5
A
51 68Right-handed alpha
Helix 6
AA6
A
74 97Right-handed alpha
Helix 7
AA7
A
135 146Right-handed alpha
Helix 8
AA8
A
147 149Right-handed 310
Helix 9
AA9
A
151 166Right-handed alpha
Helix 10
AB1
A
192 218Right-handed alpha
Helix 11
AB2
A
222 226Right-handed 310
Helix 12
AB3
B
2 11Right-handed alpha
Helix 13
AB4
B
21 29Right-handed alpha
Helix 14
AB5
B
37 42Right-handed alpha
Helix 15
AB6
B
51 68Right-handed alpha
Helix 16
AB7
B
75 97Right-handed alpha
Helix 17
AB8
B
135 146Right-handed alpha
Helix 18
AB9
B
147 150Right-handed 310
Helix 19
AC1
B
151 166Right-handed alpha
Helix 20
AC2
B
192 218Right-handed alpha
Helix 21
AC3
C
3 11Right-handed alpha
Helix 22
AC4
C
13 17Right-handed 310
Helix 23
AC5
C
21 29Right-handed alpha
Helix 24
AC6
C
35 40Right-handed 310
Helix 25
AC7
C
51 68Right-handed alpha
Helix 26
AC8
C
74 97Right-handed alpha
Helix 27
AC9
C
135 146Right-handed alpha
Helix 28
AD1
C
147 150Right-handed 310
Helix 29
AD2
C
151 166Right-handed alpha
Helix 30
AD3
C
192 217Right-handed alpha
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There are 6 sheets in PDB entry 4WUZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 33first strand
Strand 2
A
114 116parallel
Strand 3
A
106 107anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 101first strand
Strand 2
A
120 122anti-parallel
Strand 3
A
127 131anti-parallel
Strand 4
A
169 175parallel
Strand 5
A
184 190anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 33first strand
Strand 2
B
114 116parallel
Strand 3
B
106 107anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
100 101first strand
Strand 2
B
120 122anti-parallel
Strand 3
B
127 131anti-parallel
Strand 4
B
169 175parallel
Strand 5
B
184 190anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
32 33first strand
Strand 2
C
114 116parallel
Strand 3
C
106 107anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
100 101first strand
Strand 2
C
120 122anti-parallel
Strand 3
C
127 131anti-parallel
Strand 4
C
169 175parallel
Strand 5
C
184 190anti-parallel
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