Analysis of interatomic Contacts of Structural Units in PDB entry:
4WW0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4WW0 entry

There are 3 chains in PDB entry 4WW0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 141LYS 608
B
 HIS 140LYS 607
C
 ILE 146LYS 607
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 69 helices in PDB entry 4WW0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
153 157Right-handed 310
Helix 2
AA2
A
160 167Right-handed alpha
Helix 3
AA3
A
167 176Right-handed alpha
Helix 4
AA4
A
176 182Right-handed alpha
Helix 5
AA5
A
200 213Right-handed alpha
Helix 6
AA6
A
222 224Right-handed 310
Helix 7
AA7
A
230 247Right-handed alpha
Helix 8
AA8
A
255 260Right-handed alpha
Helix 9
AA9
A
275 289Right-handed alpha
Helix 10
AB1
A
290 293Right-handed 310
Helix 11
AB2
A
303 307Right-handed 310
Helix 12
AB3
A
308 313Right-handed 310
Helix 13
AB4
A
327 340Right-handed alpha
Helix 14
AB5
A
349 356Right-handed alpha
Helix 15
AB6
A
361 380Right-handed alpha
Helix 16
AB7
A
385 395Right-handed alpha
Helix 17
AB8
A
408 427Right-handed alpha
Helix 18
AB9
A
462 485Right-handed alpha
Helix 19
AC1
A
490 492Right-handed 310
Helix 20
AC2
A
493 510Right-handed alpha
Helix 21
AC3
A
540 569Right-handed alpha
Helix 22
AC4
A
569 584Right-handed alpha
Helix 23
AC5
A
587 598Right-handed alpha
Helix 24
AC6
B
153 157Right-handed 310
Helix 25
AC7
B
160 167Right-handed alpha
Helix 26
AC8
B
167 176Right-handed alpha
Helix 27
AC9
B
176 184Right-handed alpha
Helix 28
AD1
B
200 213Right-handed alpha
Helix 29
AD2
B
222 225Right-handed 310
Helix 30
AD3
B
230 246Right-handed alpha
Helix 31
AD4
B
255 260Right-handed alpha
Helix 32
AD5
B
274 289Right-handed alpha
Helix 33
AD6
B
303 307Right-handed 310
Helix 34
AD7
B
308 313Right-handed 310
Helix 35
AD8
B
327 340Right-handed alpha
Helix 36
AD9
B
349 356Right-handed alpha
Helix 37
AE1
B
361 380Right-handed alpha
Helix 38
AE2
B
385 395Right-handed alpha
Helix 39
AE3
B
408 427Right-handed alpha
Helix 40
AE4
B
462 485Right-handed alpha
Helix 41
AE5
B
490 492Right-handed 310
Helix 42
AE6
B
493 510Right-handed alpha
Helix 43
AE7
B
540 569Right-handed alpha
Helix 44
AE8
B
569 584Right-handed alpha
Helix 45
AE9
B
587 598Right-handed alpha
Helix 46
AF1
C
153 157Right-handed 310
Helix 47
AF2
C
160 167Right-handed alpha
Helix 48
AF3
C
167 176Right-handed alpha
Helix 49
AF4
C
176 184Right-handed alpha
Helix 50
AF5
C
200 213Right-handed alpha
Helix 51
AF6
C
222 224Right-handed 310
Helix 52
AF7
C
229 229Right-handed 310
Helix 53
AF8
C
230 246Right-handed alpha
Helix 54
AF9
C
255 260Right-handed alpha
Helix 55
AG1
C
274 289Right-handed alpha
Helix 56
AG2
C
290 293Right-handed 310
Helix 57
AG3
C
303 307Right-handed 310
Helix 58
AG4
C
308 313Right-handed 310
Helix 59
AG5
C
327 340Right-handed alpha
Helix 60
AG6
C
349 357Right-handed alpha
Helix 61
AG7
C
361 380Right-handed alpha
Helix 62
AG8
C
385 395Right-handed alpha
Helix 63
AG9
C
408 427Right-handed alpha
Helix 64
AH1
C
462 485Right-handed alpha
Helix 65
AH2
C
490 492Right-handed 310
Helix 66
AH3
C
493 510Right-handed alpha
Helix 67
AH4
C
540 569Right-handed alpha
Helix 68
AH5
C
569 584Right-handed alpha
Helix 69
AH6
C
587 598Right-handed alpha
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There are 6 sheets in PDB entry 4WW0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 147first strand
Strand 2
A
216 220anti-parallel
Strand 3
A
249 254parallel
Strand 4
A
295 301parallel
Strand 5
A
190 194parallel
Strand 6
A
319 322parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
438 439first strand
Strand 2
A
585 586anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
143 145first strand
Strand 2
B
216 220anti-parallel
Strand 3
B
249 254parallel
Strand 4
B
295 301parallel
Strand 5
B
190 194parallel
Strand 6
B
319 322parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
438 439first strand
Strand 2
B
585 586anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
147 148first strand
Strand 2
C
216 220anti-parallel
Strand 3
C
249 254parallel
Strand 4
C
295 301parallel
Strand 5
C
190 194parallel
Strand 6
C
319 322parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
438 439first strand
Strand 2
C
585 586anti-parallel
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